Transcript Information: S_Transcript_50717.p1


Annotated TAIR IDAT3G48420.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17929743-17931551 | Forward length=319
E-Value3.6E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1109.9232659714
Replicate 2109.03494549438
Replicate 3124.28800404166
Condition 2: 8 Hour
Replicate 184.683434012963
Replicate 294.512954760584
Replicate 399.473955489913
Condition 3: 24 Hour
Replicate 192.128421677723
Replicate 2122.0232753712
Replicate 3104.90908325027


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50717.p1 GENE.S_Transcript_50717~~S_Transcript_50717.p1 ORF type:5prime_partial len:138 (+),score=36.42,HAD_2|PF13419.2|2e-11,Hydrolase_like|PF13242.2|2e-09,Hydrolase|PF00702.22|2.1e-09 S_Transcript_50717:1-414(+)
CTGGTTGATCAGGCTTTGGGGAATGGAGTCAAAGTGGCTGTCTGCAGTACATCTAATGAGAAGGCGGTATCTGCGATAGTTTCATGCTTGTTGGGCCCTGAACGAGCAGAGAAGATTCAGATTTTCGCTGGAGATGTTGTTCCTCGTAAAAAGCCTGATCCTGCCATTTATGTGCTTGCATCTGAAACCCTAGGAGTTGATCCAGCAAGCTGCGTTGTCATAGAGGACAGTGCCATAGGTCTCGCAGCAGCCAAAGCCGCAGGAATGAAGTGCATAGTGACCAAGAGCGGCTACACAGCAGATGAAGACTTTGAGAACGCAGATGCAGTTTTTGATTGCATCGGAGATCCACCAGAGGAGAGGTTCAACTTGGATTTCTGTGCAAGCCTTCTAGCAAAGCAGCTTGCTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50717.p1 GENE.S_Transcript_50717~~S_Transcript_50717.p1 ORF type:5prime_partial len:138 (+),score=36.42,HAD_2|PF13419.2|2e-11,Hydrolase_like|PF13242.2|2e-09,Hydrolase|PF00702.22|2.1e-09 S_Transcript_50717:1-414(+)
LVDQALGNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIQIFAGDVVPRKKPDPAIYVLASETLGVDPASCVVIEDSAIGLAAAKAAGMKCIVTKSGYTADEDFENADAVFDCIGDPPEERFNLDFCASLLAKQLAS*

Click here to download the sequence:
Link to NCBI Protein BLAST