Transcript Information: S_Transcript_50819.p1


Annotated TAIR IDAT1G54130.1
Annotated Gene NameRELA/SPOT Homolog 3
Annotated Gene Symbol(s)RSH3, AT-RSH3, ATRSH3
Annotation TypeHomolog
Chromosome Positionchr1:20211177-20213761 | Forward length=715
E-Value2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.569965430078
Replicate 20.72694529019818
Replicate 31.0330362880435
Condition 2: 8 Hour
Replicate 11.299900233499
Replicate 20.18428211400104
Replicate 30.87791794089709
Condition 3: 24 Hour
Replicate 10.86371862236287
Replicate 21.3068095637103
Replicate 30.45707164490326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50819.p1 GENE.S_Transcript_50819~~S_Transcript_50819.p1 ORF type:complete len:607 (+),score=88.87,HD_4|PF13328.2|2.1e-45,RelA_SpoT|PF04607.13|3.3e-23,HD|PF01966.18|5.2e-07 S_Transcript_50819:167-1987(+)
ATGATCTCATATTCAACGACCACGAATTTCACGATGCTAGGGCAATCAATTTCCCCTTTTCGCCTTCTTCACCGCAATTTCCGTCGTACACGCCATACGGCCTCTAAATTCCGGTCCTTGATCCATCAAATTTCGCCCAATTTGGTGGTTTCTTCATCGCTTGGTCCTCTCTTCGCCTCTGCTGCCGCTGTCGGGTCCTCCTCTCACGCCGCTGTGGCCTCCACCATCACTCAGGTTGCCGTCACCGCCGTCGCAATTGCTTCTGGTGCTTGTCTTTCTACTAAGGTCGATTTCTTGTGTCCCAAACCCGATGAACAACCTAGTCCTTTCATACTGGATGGGGTGGATGTTACTGGCTATCCCATATTCAATGATCCCAAGGTGCAAAAGGCTATATCTTTTGCTAGGAAAGCTCATCATGGCCAGCTACGTAAAACTGGGGAGCCTTACCTGGCACATTGTCTTCATACTGGAAAAATCTTGGCTATATTAGTGCCACCAAGTGGACAACGAGCTATTGATACAGTTGTGGCTGGGATTCTTCATGATGTTGTTGATGATACAAGTGAAAGTCTTCTTAGTATAAGAGAAATGTTTGGTAATGATGTGTCACAGATGGTAGCTGGTGTTTCACGGTTAAGTTATATTAATCAGCTTTTGAGAAGAAACCGCAGAATAAGTGCAAACCAGAGTAGTATTCGGCATGAAGAGGCAAATAATTTGCGAGTGATGCTTTTGGGCATGGTTGATGATCCACGTGTGGTACTCATAAAGCTGGCTGATCGCCTTCATAACATGAGAACCATTCATGCTTTGCCATTGTCCAAGGCTCAAGCTGTTGCCGAAGAAACTCTGGTTGTCTGGTGCTCCCTTGCCTCAAGATTGGGCCTGTGGGCCTTAAAGGCCGAACTAGAAGATCTGTGCTTTGCCGTTTTGCAGCCTCAAATGTTCTGTCAAATTAGAGCTGAGCTGGCTTCCATGTGGAGCCCTTTCAGAAGGGCAGGTCTTAAAAGAGCATCAGCGAAAAGCAGTTCGCTTTCAAGCTCCGATGCAATTGCTTCGAGTAGCTTTAACTGTTCTGTCACTATTGACAAAGATAATATAGATACGAAGGATCTTCTGGAAGCAGTCTTACCCTTTGAACTCTTGCTAGATCGGGAAAAACGAACGAACTTCCTCAGTAATCTGACAAGATATTCCAAGATTTCAACAAAACCAAAGGTTGTAAGGGATGCTGTAAGTGCTCTGGCGTCCTTAGCAGTTTGTGAGGAGGCACTTGAGCGTGAGCTTTTGATATCGACTTCCTATGTACCAGGGATGGAAGTTACCCTTTCCAGCCGACTGAAAAGCTTGTACAGCATATTCTGTAAGATGAAAAGAAAAGAAGTTGATATAAGTCAGGTATATGATGCCCGTGCATTGAGAATAGTCATTGGAGATAAGAATGGAACACTGCGTGGACCTGCTGTCAGCTGTTGCTACAGTGTCCTTGATATTTTACATAGGCTCTGGTCGCCTATTGATGGTGAATTTGATGACTACATTGTTAACCCAAAGCCAAGTGGCTATCAGTCTTTGCATACTGCTGTACAAGGTCCTGATAATTCACCCTTGGAAGTTCAAATAAGGACACAGCTTTTAAGCAGGGTTTTTGGTATCATCAATTCTAGAGGATGCACGAATATGCTGAGCATGGGCTTGCTGCACATTGGCTTTATAAAGAGACAAATAACAATTCACTTTCTTCTACAAGCTTGGATGGCTCTCATGTTAAAGATTTCTCCAACTTGTCCCAAGGTTTGGAGGAGCAAAACTCCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50819.p1 GENE.S_Transcript_50819~~S_Transcript_50819.p1 ORF type:complete len:607 (+),score=88.87,HD_4|PF13328.2|2.1e-45,RelA_SpoT|PF04607.13|3.3e-23,HD|PF01966.18|5.2e-07 S_Transcript_50819:167-1987(+)
MISYSTTTNFTMLGQSISPFRLLHRNFRRTRHTASKFRSLIHQISPNLVVSSSLGPLFASAAAVGSSSHAAVASTITQVAVTAVAIASGACLSTKVDFLCPKPDEQPSPFILDGVDVTGYPIFNDPKVQKAISFARKAHHGQLRKTGEPYLAHCLHTGKILAILVPPSGQRAIDTVVAGILHDVVDDTSESLLSIREMFGNDVSQMVAGVSRLSYINQLLRRNRRISANQSSIRHEEANNLRVMLLGMVDDPRVVLIKLADRLHNMRTIHALPLSKAQAVAEETLVVWCSLASRLGLWALKAELEDLCFAVLQPQMFCQIRAELASMWSPFRRAGLKRASAKSSSLSSSDAIASSSFNCSVTIDKDNIDTKDLLEAVLPFELLLDREKRTNFLSNLTRYSKISTKPKVVRDAVSALASLAVCEEALERELLISTSYVPGMEVTLSSRLKSLYSIFCKMKRKEVDISQVYDARALRIVIGDKNGTLRGPAVSCCYSVLDILHRLWSPIDGEFDDYIVNPKPSGYQSLHTAVQGPDNSPLEVQIRTQLLSRVFGIINSRGCTNMLSMGLLHIGFIKRQITIHFLLQAWMALMLKISPTCPKVWRSKTP*

Click here to download the sequence:
Link to NCBI Protein BLAST