Transcript Information: S_Transcript_50820.p1


Annotated TAIR IDAT1G54130.1
Annotated Gene NameRELA/SPOT Homolog 3
Annotated Gene Symbol(s)RSH3, AT-RSH3, ATRSH3
Annotation TypeHomolog
Chromosome Positionchr1:20211177-20213761 | Forward length=715
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.616298460622
Replicate 213.553584347111
Replicate 312.288058568404
Condition 2: 8 Hour
Replicate 114.651971407268
Replicate 215.370958361013
Replicate 313.070109790121
Condition 3: 24 Hour
Replicate 114.756647623554
Replicate 212.692781310079
Replicate 313.543014605519


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50820.p1 GENE.S_Transcript_50820~~S_Transcript_50820.p1 ORF type:complete len:866 (+),score=172.06,HD_4|PF13328.2|3.9e-45,RelA_SpoT|PF04607.13|1.2e-30,TGS|PF02824.17|6.4e-07,HD|PF01966.18|8.9e-07 S_Transcript_50820:167-2764(+)
ATGATCTCATATTCAACGACCACGAATTTCACGATGCTAGGGCAATCAATTTCCCCTTTTCGCCTTCTTCACCGCAATTTCCGTCGTACACGCCATACGGCCTCTAAATTCCGGTCCTTGATCCATCAAATTTCGCCCAATTTGGTGGTTTCTTCATCGCTTGGTCCTCTCTTCGCCTCTGCTGCCGCTGTCGGGTCCTCCTCTCACGCCGCTGTGGCCTCCACCATCACTCAGGTTGCCGTCACCGCCGTCGCAATTGCTTCTGGTGCTTGTCTTTCTACTAAGGTCGATTTCTTGTGTCCCAAACCCGATGAACAACCTAGTCCTTTCATACTGGATGGGGTGGATGTTACTGGCTATCCCATATTCAATGATCCCAAGGTGCAAAAGGCTATATCTTTTGCTAGGAAAGCTCATCATGGCCAGCTACGTAAAACTGGGGAGCCTTACCTGGCACATTGTCTTCATACTGGAAAAATCTTGGCTATATTAGTGCCACCAAGTGGACAACGAGCTATTGATACAGTTGTGGCTGGGATTCTTCATGATGTTGTTGATGATACAAGTGAAAGTCTTCTTAGTATAAGAGAAATGTTTGGTAATGATGTGTCACAGATGGTAGCTGGTGTTTCACGGTTAAGTTATATTAATCAGCTTTTGAGAAGAAACCGCAGAATAAGTGCAAACCAGAGTAGTATTCGGCATGAAGAGGCAAATAATTTGCGAGTGATGCTTTTGGGCATGGTTGATGATCCACGTGTGGTACTCATAAAGCTGGCTGATCGCCTTCATAACATGAGAACCATTCATGCTTTGCCATTGTCCAAGGCTCAAGCTGTTGCCGAAGAAACTCTGGTTGTCTGGTGCTCCCTTGCCTCAAGATTGGGCCTGTGGGCCTTAAAGGCCGAACTAGAAGATCTGTGCTTTGCCGTTTTGCAGCCTCAAATGTTCTGTCAAATTAGAGCTGAGCTGGCTTCCATGTGGAGCCCTTTCAGAAGGGCAGGTCTTAAAAGAGCATCAGCGAAAAGCAGTTCGCTTTCAAGCTCCGATGCAATTGCTTCGAGTAGCTTTAACTGTTCTGTCACTATTGACAAAGATAATATAGATACGAAGGATCTTCTGGAAGCAGTCTTACCCTTTGAACTCTTGCTAGATCGGGAAAAACGAACGAACTTCCTCAGTAATCTGACAAGATATTCCAAGATTTCAACAAAACCAAAGGTTGTAAGGGATGCTGTAAGTGCTCTGGCGTCCTTAGCAGTTTGTGAGGAGGCACTTGAGCGTGAGCTTTTGATATCGACTTCCTATGTACCAGGGATGGAAGTTACCCTTTCCAGCCGACTGAAAAGCTTGTACAGCATATTCTGTAAGATGAAAAGAAAAGAAGTTGATATAAGTCAGGTATATGATGCCCGTGCATTGAGAATAGTCATTGGAGATAAGAATGGAACACTGCGTGGACCTGCTGTCAGCTGTTGCTACAGTGTCCTTGATATTTTACATAGGCTCTGGTCGCCTATTGATGGTGAATTTGATGACTACATTGTTAACCCAAAGCCAAGTGGCTATCAGTCTTTGCATACTGCTGTACAAGGTCCTGATAATTCACCCTTGGAAGTTCAAATAAGGACACAGAGGATGCACGAATATGCTGAGCATGGGCTTGCTGCACATTGGCTTTATAAAGAGACAAATAACAATTCACTTTCTTCTACAAGCTTGGATGGCTCTCATGTTAAAGATTTCTCCAACTTGTCCCAAGGTTTGGAGGAGCAAAACTCCATAGAAGAGGATATCTTTTGGAGGTATAGTTCCTTGAAAGCTGGACATCCATTACTTAGGGTGGAAAGAAGTAACTTGCTTGCTGCTGTTATTATCAGTGTAGATAAGGATGGGAAGGAACTACTTGTTGCTGTCAGCTTTGGATTAGCAGCATCTGAAGCAGTTGCTGACCGAAGAACTCCTTTTCAAATAAAGAGATGGGAAGCTTATGCTAGGTTATACAAAAAGGTTTTGGATGAAGGTTGGTTTGAACCAGGGCATGGAGATTGGTGTACTTGTCTTGAGAAGTACACACTTTGCAGAGATGGAATCTATCATAAGCAAGATCAATTTGGTCGTCTGCTGCCAACTTTTATGCAGATCATTGATCTGACAGAGGAGGAAGAATATAAATACTGGGCAGTGGTCTCTGCTGTTTTTGATGGAAAAGATGTTGATCCAATTCAATCTTGTCCTAGGAGCTGCGAGGAACCCATCAGTAGGGCATTCTCATCTTCCATGGAGGATAATATCAATAACAAGGTCCGCCTACTTAGGACAATGCTTCAATGGGAGGAGCAAATGTGTTCTGAAGTAGGCGTTAAACAAGGCTTCATATCAAGGAAATTGTGTGAAAGGCCTGATGCCTTGTTACTTGGGGAAGTAGCAGTAGTATTTTGGCCAGGTGGTGACATCATGAGGCTAAGAGCTGGTAGTACTGCTGCAGATGCTGCAAGAAGAATAGGGCTGGAAGGCAAGTTGGTTTTGGTAAATGGTCAACTTGTGCAACCCAATATTGAGCTCAAAGATGGTGATGTGGTTGAAGTGAGACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50820.p1 GENE.S_Transcript_50820~~S_Transcript_50820.p1 ORF type:complete len:866 (+),score=172.06,HD_4|PF13328.2|3.9e-45,RelA_SpoT|PF04607.13|1.2e-30,TGS|PF02824.17|6.4e-07,HD|PF01966.18|8.9e-07 S_Transcript_50820:167-2764(+)
MISYSTTTNFTMLGQSISPFRLLHRNFRRTRHTASKFRSLIHQISPNLVVSSSLGPLFASAAAVGSSSHAAVASTITQVAVTAVAIASGACLSTKVDFLCPKPDEQPSPFILDGVDVTGYPIFNDPKVQKAISFARKAHHGQLRKTGEPYLAHCLHTGKILAILVPPSGQRAIDTVVAGILHDVVDDTSESLLSIREMFGNDVSQMVAGVSRLSYINQLLRRNRRISANQSSIRHEEANNLRVMLLGMVDDPRVVLIKLADRLHNMRTIHALPLSKAQAVAEETLVVWCSLASRLGLWALKAELEDLCFAVLQPQMFCQIRAELASMWSPFRRAGLKRASAKSSSLSSSDAIASSSFNCSVTIDKDNIDTKDLLEAVLPFELLLDREKRTNFLSNLTRYSKISTKPKVVRDAVSALASLAVCEEALERELLISTSYVPGMEVTLSSRLKSLYSIFCKMKRKEVDISQVYDARALRIVIGDKNGTLRGPAVSCCYSVLDILHRLWSPIDGEFDDYIVNPKPSGYQSLHTAVQGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETNNNSLSSTSLDGSHVKDFSNLSQGLEEQNSIEEDIFWRYSSLKAGHPLLRVERSNLLAAVIISVDKDGKELLVAVSFGLAASEAVADRRTPFQIKRWEAYARLYKKVLDEGWFEPGHGDWCTCLEKYTLCRDGIYHKQDQFGRLLPTFMQIIDLTEEEEYKYWAVVSAVFDGKDVDPIQSCPRSCEEPISRAFSSSMEDNINNKVRLLRTMLQWEEQMCSEVGVKQGFISRKLCERPDALLLGEVAVVFWPGGDIMRLRAGSTAADAARRIGLEGKLVLVNGQLVQPNIELKDGDVVEVRL*

Click here to download the sequence:
Link to NCBI Protein BLAST