Transcript Information: S_Transcript_50872.p1


Annotated TAIR IDAT1G02475.1
Annotated Gene NamePolyketide cyclase/dehydrase and lipid transport superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:514110-515331 | Reverse length=219
E-Value2.5E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.224031274274
Replicate 215.993113827718
Replicate 316.268265016975
Condition 2: 8 Hour
Replicate 123.280993795997
Replicate 223.153397937184
Replicate 326.156127410479
Condition 3: 24 Hour
Replicate 114.118090640209
Replicate 217.022600834636
Replicate 316.30070992121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50872.p1 GENE.S_Transcript_50872~~S_Transcript_50872.p1 ORF type:complete len:229 (+),score=29.44,Polyketide_cyc|PF03364.16|4.3e-12,Polyketide_cyc2|PF10604.5|9.9e-08 S_Transcript_50872:182-868(+)
ATGTGCTCTTATTCAACTGCCATGGCATGCCCAGCATCATCTGTATCTGTATCGGCTTCCCAAGTTTCATCACACTTGATCAGAGTCAAACTCAATTTTAGGGCATCCCAACTCAAGTTTTCTCCTTTATTAAAAAGGGCCAAATATATTGCTCATCTTCTCTTCAATGCTCCCAATGGCATTGCCACCAGAACTCGTCGTTCCGTCAAACCCTTTTTCCAACCTGTCATGGAATGGCAGGATTGCACGGTCAAGATGGAAGTTGATGTACCTGCTTCTGTAGCGTACGACTGTTACAGTGACCGTGAAGCCCTGTCCCAATGGATGCCCTTCATTTCAACTGTAAAGAATGTAGAGGATAAGCCAGATTTATCTAGATGGACTCTGAAATATGAAGCATTTGGCCGTGATATTGAGTTCTCTTGGCTAGCCCGGAATCTTCAGCCCATTGTAAATCAGAAAATTCACTGGAGATCTCTGGAAGGTCTTCCAAACAGAGGTGCTGTACGATTTTTCCCAAAAGGTCCTTCTTCATGTCTTGTAGAGTTGACTGTATCATATGAAGTTCCTCAACTTCTTGCTCCATTTGCATCGGCACTTCAACCTTTCCTCAAAAGCCTTCTACTACAGGGATTGGAAAGGTTTTCAACTTTCGCTAAAAGCTATCAACTAAACTCAACCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50872.p1 GENE.S_Transcript_50872~~S_Transcript_50872.p1 ORF type:complete len:229 (+),score=29.44,Polyketide_cyc|PF03364.16|4.3e-12,Polyketide_cyc2|PF10604.5|9.9e-08 S_Transcript_50872:182-868(+)
MCSYSTAMACPASSVSVSASQVSSHLIRVKLNFRASQLKFSPLLKRAKYIAHLLFNAPNGIATRTRRSVKPFFQPVMEWQDCTVKMEVDVPASVAYDCYSDREALSQWMPFISTVKNVEDKPDLSRWTLKYEAFGRDIEFSWLARNLQPIVNQKIHWRSLEGLPNRGAVRFFPKGPSSCLVELTVSYEVPQLLAPFASALQPFLKSLLLQGLERFSTFAKSYQLNSTN*

Click here to download the sequence:
Link to NCBI Protein BLAST