Transcript Information: S_Transcript_509020.p1


Annotated TAIR IDAT1G42190.1
Annotated Gene NameGAG/POL/ENV polyprotein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:15761082-15761276 | Forward length=64
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70034213776791
Replicate 20.38706648346517
Replicate 30.9706703201895
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.37396223868388
Condition 3: 24 Hour
Replicate 10.38324357001042
Replicate 20.1988053647048
Replicate 30.22124600355365


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_509020.p1 GENE.S_Transcript_509020~~S_Transcript_509020.p1 ORF type:internal len:114 (+),score=12.73 S_Transcript_509020:1-339(+)
TTGCACAGAAAGAAATTGGAATTTCAGGAGGGTGACAGAGTATTTTTGAAAGTGTCACCAATGCTTGGTGTAAAGAGATTGGAAAGAAAGGAAAATCGAGTCCGAGATATATTGGACCATACAAAATTGTCAAGAGTCGAAGAAGTAGCATACAAATTAGAATTGCCTGCAAAGCAATCACGAATCCACGATACATTTCATGTGTCCCAGCTCAGAAAATATATACTAGATCCATCACATATATTAGAAGAAGAACCGATACAGTTGGAGGAAAACTTGACATATACTGAATATCCAACAGAAATAGTGGATCAGAGGATTAAACAGGTTAGAAATCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_509020.p1 GENE.S_Transcript_509020~~S_Transcript_509020.p1 ORF type:internal len:114 (+),score=12.73 S_Transcript_509020:1-339(+)
LHRKKLEFQEGDRVFLKVSPMLGVKRLERKENRVRDILDHTKLSRVEEVAYKLELPAKQSRIHDTFHVSQLRKYILDPSHILEEEPIQLEENLTYTEYPTEIVDQRIKQVRNQ

Click here to download the sequence:
Link to NCBI Protein BLAST