Transcript Information: S_Transcript_50909.p1


Annotated TAIR IDAT2G19830.1
Annotated Gene NameSNF7 family protein
Annotated Gene Symbol(s)SNF7.2, VPS32
Annotation TypeOrtholog
Chromosome Positionchr2:8558101-8559389 | Reverse length=213
E-Value1.2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.468540124641
Replicate 256.197671514424
Replicate 358.286005547228
Condition 2: 8 Hour
Replicate 141.041317214105
Replicate 233.55777295959
Replicate 330.365028192002
Condition 3: 24 Hour
Replicate 157.497382017696
Replicate 257.514767113561
Replicate 358.296234709938


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50909.p1 GENE.S_Transcript_50909~~S_Transcript_50909.p1 ORF type:3prime_partial len:106 (+),score=29.08,Snf7|PF03357.17|1.6e-13 S_Transcript_50909:385-699(+)
ATGTCGTCGAATATGTTGTCGAGGCTCTTTGGTGGCAAATCCAAGGAGGAAGTTACTTCAGGCTCTACTTTGGCTACCCTAGATAAATTGAACGAGACACTTGAAATGTTAGAGAAGAAAGAGCAAGTTCTTATAAAAAAGGCAGCTCAAGAGGTTGAGAAGGCAAAAGAGTTCACACGAGCAAAGAATAAGCGTGCTGCCATACAATGCTTAAAGAGGAAGAGGTTGTATGAACAGCAAGTAGAGCAGCTTGGGAATTTTCAATTACGAATTCATGATCAGATGATAATGCTTGAAGGGGCTAAAGCGACAACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50909.p1 GENE.S_Transcript_50909~~S_Transcript_50909.p1 ORF type:3prime_partial len:106 (+),score=29.08,Snf7|PF03357.17|1.6e-13 S_Transcript_50909:385-699(+)
MSSNMLSRLFGGKSKEEVTSGSTLATLDKLNETLEMLEKKEQVLIKKAAQEVEKAKEFTRAKNKRAAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATT

Click here to download the sequence:
Link to NCBI Protein BLAST