Transcript Information: S_Transcript_509429.p1


Annotated TAIR IDAT1G20696.2
Annotated Gene Namehigh mobility group B3
Annotated Gene Symbol(s)HMGB3, NFD3, NFD03
Annotation TypeHomolog
Chromosome Positionchr1:7179825-7181193 | Forward length=147
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0862449483747
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_509429.p1 GENE.S_Transcript_509429~~S_Transcript_509429.p1 ORF type:internal len:98 (+),score=26.12,HMG_box|PF00505.15|5.9e-21,HMG_box_2|PF09011.6|2.8e-14,HMG_box_2|PF09011.6|1.6e+04 S_Transcript_509429:3-293(+)
TCCAGCAAGCCCGCTCCTCCCAAGAGACCCTTGACTGCTTTCTTCCTCTTCAAGGAAGACGTTTTCCAGAAGACCAAGGAAGAGCACCCCGAATCAAAGGTCACTGAACTCACTAAGATCATTTCTGAGAAGTGGAGAAAAATCGATGAAGCTGATAAGGAAAAATACAACAAAAAGAATCAAGACGCCAAGGCTAATTATGAAAGAGAAATGAAGGAGTACGAAGCCAAGCACGGAAAGGTTGAAAAGAAAAAGAGAGCCACTAAGGGCAAAAAGGAAAAGGGTACCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_509429.p1 GENE.S_Transcript_509429~~S_Transcript_509429.p1 ORF type:internal len:98 (+),score=26.12,HMG_box|PF00505.15|5.9e-21,HMG_box_2|PF09011.6|2.8e-14,HMG_box_2|PF09011.6|1.6e+04 S_Transcript_509429:3-293(+)
SSKPAPPKRPLTAFFLFKEDVFQKTKEEHPESKVTELTKIISEKWRKIDEADKEKYNKKNQDAKANYEREMKEYEAKHGKVEKKKRATKGKKEKGTK

Click here to download the sequence:
Link to NCBI Protein BLAST