Transcript Information: S_Transcript_50963.p1


Annotated TAIR IDAT1G03600.1
Annotated Gene Namephotosystem II family protein
Annotated Gene Symbol(s)PSB27
Annotation TypeOrtholog
Chromosome Positionchr1:898916-899440 | Forward length=174
E-Value1.5E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1249.10430348706
Replicate 2233.23520389373
Replicate 3280.19212708377
Condition 2: 8 Hour
Replicate 1215.10828493804
Replicate 2226.08073128469
Replicate 3210.90773437724
Condition 3: 24 Hour
Replicate 1270.14386975014
Replicate 2270.13574170814
Replicate 3270.54950737662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50963.p1 GENE.S_Transcript_50963~~S_Transcript_50963.p1 ORF type:5prime_partial len:161 (-),score=33.19,PSII_Pbs27|PF13326.2|7.3e-31 S_Transcript_50963:164-646(-)
GTGTGCTCTTCCGATCTCAAACTCACCACTAATATCACTACCACCCCTGTCACTCCACCCGCCACCACGGCCATCGCCCTCAGCCGTCGCCAGCTCACCGCGACCGCCCTTGCGGCCGCCATTCTCTCTCCTGCACTTCTATCACCCGCCGCTGCCTGGGCCTCCTCTGACGAGGAATACGTAAATGAGACAAAGGAGGTGATCAACAAGGTCCGGAGTACCATCACTATGGACAGAAATGACCCAAATGTGGCTGATGCAGTTGCCGAGCTTAGAGAAACTTCCAACTCATGGGTTGCTAAGTATAGGAGAGAGAAGGCTCTTCTTGGCAGGGTTTCATTCCGGGACATTTACTCAGCCCTCAATGCTGTTTCTGGCCATTACATTAGTTTTGGACCTACTGCTCCTATCCCTGCTAAGAGGAGGGCTAGGATCTTGGAGGAGATGGATACTGCTGAAAAGGCTTTATTAAGAGGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50963.p1 GENE.S_Transcript_50963~~S_Transcript_50963.p1 ORF type:5prime_partial len:161 (-),score=33.19,PSII_Pbs27|PF13326.2|7.3e-31 S_Transcript_50963:164-646(-)
VCSSDLKLTTNITTTPVTPPATTAIALSRRQLTATALAAAILSPALLSPAAAWASSDEEYVNETKEVINKVRSTITMDRNDPNVADAVAELRETSNSWVAKYRREKALLGRVSFRDIYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKALLRGR*

Click here to download the sequence:
Link to NCBI Protein BLAST