Transcript Information: S_Transcript_50964.p1


Annotated TAIR IDAT1G03600.1
Annotated Gene Namephotosystem II family protein
Annotated Gene Symbol(s)PSB27
Annotation TypeOrtholog
Chromosome Positionchr1:898916-899440 | Forward length=174
E-Value6.2E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1321.44917222268
Replicate 2285.9486264561
Replicate 3349.68670945029
Condition 2: 8 Hour
Replicate 1302.62885360156
Replicate 2332.68698510874
Replicate 3321.17473750876
Condition 3: 24 Hour
Replicate 1338.96386629787
Replicate 2326.0787721743
Replicate 3344.74850582948


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_50964.p1 GENE.S_Transcript_50964~~S_Transcript_50964.p1 ORF type:complete len:178 (+),score=39.87,PSII_Pbs27|PF13326.2|7.2e-31 S_Transcript_50964:854-1387(+)
ATGGCCTCCCCTGCCTTGATCACCCCAACTTCCAAGCCCAAAACTCTCCCTTCTAACTCCATCAAATCCAAACTCACCACTAATATCACTACCACCTCTGTCACTCCACCCGCCACCACGGCCACCGCCCTCAGCCGTCGCCAGCTCACAGCCACTGCCCTTGCGGCTGCCATTCTATCTCCTACACTTCTATCCCCCGCCACTGCCTGGGCCTCCGACGATGAGGAATACGTAAATGAGACAAAGGAGGTGATCAACAAGGTCCGGAGTACCATCACTATGGACAGAAATGACCCAAATGTGGCTGATGCAGTTGCCGAGCTTAGAGAAACTTCCAACTCATGGGTTGCTAAGTATAGGAGAGAGAAGGCTCTTCTTGGCAGGGTTTCATTCCGGGACATCTACTCAGCCCTCAATGCTGTTTCTGGCCATTACATTAGTTTTGGACCTACTGCTCCTATCCCTGCTAAGAGGAGGGCTAGGATCTTGGAGGAGATGGATACTGCTGAAAAGGCTTTATTAAGAGGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_50964.p1 GENE.S_Transcript_50964~~S_Transcript_50964.p1 ORF type:complete len:178 (+),score=39.87,PSII_Pbs27|PF13326.2|7.2e-31 S_Transcript_50964:854-1387(+)
MASPALITPTSKPKTLPSNSIKSKLTTNITTTSVTPPATTATALSRRQLTATALAAAILSPTLLSPATAWASDDEEYVNETKEVINKVRSTITMDRNDPNVADAVAELRETSNSWVAKYRREKALLGRVSFRDIYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKALLRGR*

Click here to download the sequence:
Link to NCBI Protein BLAST