Transcript Information: S_Transcript_509709.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15207429277246
Replicate 20
Replicate 30.10538706333486
Condition 2: 8 Hour
Replicate 10
Replicate 20.2556782701683
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.25901498944397
Replicate 30.14412596802923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_509709.p1 GENE.S_Transcript_509709~~S_Transcript_509709.p1 ORF type:5prime_partial len:175 (+),score=19.07,RVT_1|PF00078.23|3.1e-13 S_Transcript_509709:3-527(+)
TTGTCCCCTTATTTGTTTGTCTTGTGTATGGAATATCTCAGTAGGTGCTTGAAGCAATTGGATTCCAATCCTGATTTCAACTATCATCCTCGGTGTGCTAAGTTTAAAATTACTCATCTCTGTTTTGCGGATGATCTTATGTTATTTACTCGGGGTGACCTTACTTCCATCACTCTCCTCCAGGAGGTGTTTCAGCACTTCTCTTTAGTTTCTGGACTCAAGGCCAACTTGCAGAAAAGCTCCATATTTTTTGGAGGAGTCCCTCGATTTGAGAAGGAAATGATCTTGGAAATTTTGGGCTATCAAGAGGGCACTTTGCCTGTAAGATATCTCGGGGTTCCCCTCTCTACTAGGAGGCTCACCATAGCTCAATGTGCTCCTTTGATTGAGCGAATTTTGGCTAAAATCACTCTATGGACCTCCAGATATCTTTCCTATGCAGGTCGTAAGCAGTTGATACAATCTGTTCTATTTGGTATTCAGGCCTATGGTCTCAACTTTTTATCCTGCCAAAGAAGGTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_509709.p1 GENE.S_Transcript_509709~~S_Transcript_509709.p1 ORF type:5prime_partial len:175 (+),score=19.07,RVT_1|PF00078.23|3.1e-13 S_Transcript_509709:3-527(+)
LSPYLFVLCMEYLSRCLKQLDSNPDFNYHPRCAKFKITHLCFADDLMLFTRGDLTSITLLQEVFQHFSLVSGLKANLQKSSIFFGGVPRFEKEMILEILGYQEGTLPVRYLGVPLSTRRLTIAQCAPLIERILAKITLWTSRYLSYAGRKQLIQSVLFGIQAYGLNFLSCQRRC*

Click here to download the sequence:
Link to NCBI Protein BLAST