Transcript Information: S_Transcript_509752.p1


Annotated TAIR IDAT1G06570.1
Annotated Gene Namephytoene desaturation 1
Annotated Gene Symbol(s)PDS1, HPD
Annotation TypeHomolog
Chromosome Positionchr1:2012015-2013543 | Reverse length=473
E-Value5E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.25071351769903
Replicate 30.069858848801517
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.77262994010275
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_509752.p1 GENE.S_Transcript_509752~~S_Transcript_509752.p1 ORF type:3prime_partial len:264 (+),score=18.72 S_Transcript_509752:78-866(+)
ATGGCAAAGGACACGGCTCAGAACCTTGAGGCGCGCAAGCTCAGAGGATGCAGCAACTACGTTCGCACGAATCCCAAGACGGACAAGTTTGAAGTGCAGAGCTTCCATCATCTGGAGTTCTATGCGCTGGATGCCACGTCAACCGCTAAAAGGCTCCAAGCAGGCTTGGGCATGAGCTGGGTTGCCCGATCTGACATCAGCACCGGCAACACCTCGTGCATAAGTCACGTCATCAAGTCCAACGATGTTCTGTTCGCGGTGACAGCGCCACAGCCGCAGCATGTCGTGCAATCCAGCTCGGCGTGCCCGTTGCCCGGTTATGACCCAGAAGCAGCGTTTGAGTTCTTGAAGCAGCACGGCTTGGCAGTGCGCGCAATAGGAATCAGAGTTGGCAGTGCAGAGGATGCGCATCGTGTCAGCACTGCCAATGGCGCACACAGCGTTCTGCCGCCCACCATGCTTACAGACAATGCCAGCGGCAAGTCATGCTGTGTGGCAGAGATTGCAGCATATGGCGACGTTGTGCTGCGCTTCGTTAGTGGAAGCTATGACGGGCCATTTCTACCAAACTATGCTGCCGTGGAGGCGCAGGAACACTGCTTTGGCTTGCAGCGCATGGACCATTGTGTAGGCAACGTGCCGAAGCTGTTCGAGGTGACAGACTACCTCTGCAGCATCACAGGCTTTCATGAGTTCTCAGAGTTCACAGCAGAAGATGTGGGAACCGTGGACTCTGGCCTCAACTCCATTGTCCTTGCAAACAACTCTGAGTTTGTGCTGCTCCCTGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_509752.p1 GENE.S_Transcript_509752~~S_Transcript_509752.p1 ORF type:3prime_partial len:264 (+),score=18.72 S_Transcript_509752:78-866(+)
MAKDTAQNLEARKLRGCSNYVRTNPKTDKFEVQSFHHLEFYALDATSTAKRLQAGLGMSWVARSDISTGNTSCISHVIKSNDVLFAVTAPQPQHVVQSSSACPLPGYDPEAAFEFLKQHGLAVRAIGIRVGSAEDAHRVSTANGAHSVLPPTMLTDNASGKSCCVAEIAAYGDVVLRFVSGSYDGPFLPNYAAVEAQEHCFGLQRMDHCVGNVPKLFEVTDYLCSITGFHEFSEFTAEDVGTVDSGLNSIVLANNSEFVLLPV

Click here to download the sequence:
Link to NCBI Protein BLAST