Transcript Information: S_Transcript_509937.p1


Annotated TAIR IDAT2G17750.1
Annotated Gene NameNEP-interacting protein 1
Annotated Gene Symbol(s)NIP1
Annotation TypeHomolog
Chromosome Positionchr2:7709238-7711151 | Reverse length=396
E-Value7E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23596566371674
Replicate 30.19724851426311
Condition 2: 8 Hour
Replicate 10
Replicate 20.11963555422314
Replicate 30
Condition 3: 24 Hour
Replicate 10.35045267631969
Replicate 20
Replicate 30.13487724280811


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_509937.p1 GENE.S_Transcript_509937~~S_Transcript_509937.p1 ORF type:3prime_partial len:187 (+),score=12.38,DUF239|PF03080.11|3.5e-34 S_Transcript_509937:127-684(+)
ATGGGCTACCTGAATGGCAACATTCACACACTCCTTCAATTGTTACTATTGAGTTTAGTAGTGCTGAGTTTTCCTCATGTTGAAGCACGAAGATTTCTCGAAACCGTCGAAGGCCCCCACACTGAGTTTGCCATGGTGCATGCGTCGGCTTCATCTGAGACAAGGTACTATGGAGGAAGTGCTTTGTTAAGTTTATGGAATCCTAACGTATCAAGAGAAGGCGACTTTAGTACATCTTCTTTGACGGTGCAGCTAAGTGATAAGGCTTTTGTCGAAGCTGGATGGATGGTTAATTCAAAGCGATACAATAATTCGGATGCTAATCTTTTTGTATTCTGGACGAATGATGAGACCGGGTGCTTTAACCTAGATTGCGAGGGCTTCGTGCTACAAAGCAAAAACTCTTCACTCGGCCACTCCATCAAATCAGATTCTACCTTAGGTGTTGGTGACCAGAGTTATGTTCGCATAACCATTGGCCAGGATAAAACAGGAAATTGGGTAGTCTTGGTTGGAAAGGAAGTGATAGGATACTGGCCAGCCTCTCTCTTTAGTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_509937.p1 GENE.S_Transcript_509937~~S_Transcript_509937.p1 ORF type:3prime_partial len:187 (+),score=12.38,DUF239|PF03080.11|3.5e-34 S_Transcript_509937:127-684(+)
MGYLNGNIHTLLQLLLLSLVVLSFPHVEARRFLETVEGPHTEFAMVHASASSETRYYGGSALLSLWNPNVSREGDFSTSSLTVQLSDKAFVEAGWMVNSKRYNNSDANLFVFWTNDETGCFNLDCEGFVLQSKNSSLGHSIKSDSTLGVGDQSYVRITIGQDKTGNWVVLVGKEVIGYWPASLFSE

Click here to download the sequence:
Link to NCBI Protein BLAST