Transcript Information: S_Transcript_509998.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value2.3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52525660332593
Replicate 20.29029986259888
Replicate 30.72800274014213
Condition 2: 8 Hour
Replicate 10.56119448202982
Replicate 20.29436642947009
Replicate 30.14023583950646
Condition 3: 24 Hour
Replicate 10.14371633875391
Replicate 20.5964160941144
Replicate 30.33186900533047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_509998.p1 GENE.S_Transcript_509998~~S_Transcript_509998.p1 ORF type:internal len:152 (-),score=22.57,Ank_5|PF13857.2|0.0011,Ank_5|PF13857.2|1.6e-07,Ank_5|PF13857.2|2.6e-05,Ank_2|PF12796.3|2.6e-05,Ank_2|PF12796.3|3.5e-09,Ank_3|PF13606.2|3.9e+02,Ank_3|PF13606.2|4.1e-05,Ank_3|PF13606.2|0.00029,Ank_3|PF13606.2|7.4,Ank_4|PF13637.2|0.0013,Ank_4|PF13637.2|4.1e-09,Ank|PF00023.26|4.3e+02,Ank|PF00023.26|0.023,Ank|PF00023.26|0.0012,Ank|PF00023.26|0.16 S_Transcript_509998:3-455(-)
GGAGCATGGTCATGGGACGTAGAGACTGGGGAAGAGTTCCGAGTTGGAGCAGGACTAGCAGAGCCTTATCCCATCACGTGGTGTGCGGTTGAGTACTTTGAAATCAGTGGTGCAATACTCAGAATGCTCCTAAAGAAACACTCTCCAAACAGCACTCATCTCGGAAGAACTCTTCTACACCATGCCATTCTTTGTGGTAACGTTGGGGCTGTGAATGTGCTACTTGACTGCGGAGCTGATCTTGAGTCTCCAGTTAAAACCACATCCGAGACTCTGTTCCACCCATTGCACATGGCCGCTCGACTTGGATCAATGACAATCCTCCGCTCTCTACTTGAAGCTGGCTGTGATATAAACTCGAGAACAGACACTGGTGACACTGCTCTAATGATCTGTGCAAAGTACAAGCAGCAAGAGTGCCTCAAGATATTGGCAACAGCTGGTGCTGATTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_509998.p1 GENE.S_Transcript_509998~~S_Transcript_509998.p1 ORF type:internal len:152 (-),score=22.57,Ank_5|PF13857.2|0.0011,Ank_5|PF13857.2|1.6e-07,Ank_5|PF13857.2|2.6e-05,Ank_2|PF12796.3|2.6e-05,Ank_2|PF12796.3|3.5e-09,Ank_3|PF13606.2|3.9e+02,Ank_3|PF13606.2|4.1e-05,Ank_3|PF13606.2|0.00029,Ank_3|PF13606.2|7.4,Ank_4|PF13637.2|0.0013,Ank_4|PF13637.2|4.1e-09,Ank|PF00023.26|4.3e+02,Ank|PF00023.26|0.023,Ank|PF00023.26|0.0012,Ank|PF00023.26|0.16 S_Transcript_509998:3-455(-)
GAWSWDVETGEEFRVGAGLAEPYPITWCAVEYFEISGAILRMLLKKHSPNSTHLGRTLLHHAILCGNVGAVNVLLDCGADLESPVKTTSETLFHPLHMAARLGSMTILRSLLEAGCDINSRTDTGDTALMICAKYKQQECLKILATAGADF

Click here to download the sequence:
Link to NCBI Protein BLAST