Transcript Information: S_Transcript_510020.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.2049175500698
Replicate 30.17129476238638
Condition 2: 8 Hour
Replicate 10.066022880238802
Replicate 20.069262689287079
Replicate 30.13198667247667
Condition 3: 24 Hour
Replicate 10.13526243647427
Replicate 20.14033319861515
Replicate 30.54660777348549


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_510020.p1 GENE.S_Transcript_510020~~S_Transcript_510020.p1 ORF type:3prime_partial len:323 (+),score=46.18,RVT_1|PF00078.23|9.9e-36 S_Transcript_510020:499-1464(+)
ATGAAAGGAATTTTTGATGGATTTCGGCAGTGGAAAAAGGAAGAGGTTGATATTGAGAAAGTGGTAACCGATTATTATGCTGAGCTCTTTAAGTCTTCAGGGGATCCAAATATGTCTGGGGTGTTAGATTGTGTAGAATGCCGAGTTACTCCCGAGATGAACTCAATGCTTGATAAGGCGCCCACAGCTGAAGAGATCTATACAGCACTTAACCAGATGCACTCAAAGAAGGCCCCTGGGCCAGATGGTATGCATGCACTGTTTTTCAAGAAATTCTGGCACATCGTCGGACCTAATGTCGTCCAATTTGCTAATTCATGGTGGAAGGGGGAGGTAAGTTTGTATGAGGCAAACACTACAAATATTGTTCTTATCCCAAAAGTCAAGGATCCGAAGTTCATTACTGATTACCGCCCTATAAGCCTATGTAATGTACTCTACAAAATTATCTCGAAAACCCTTGCAAATAGGCTAAAAGGAATGCTCCCCACTATGATCTCAGAAAACCAAAGTGCTTTCATCCAAGGGAGACTCATCACGGACAATGCACTTGTTGCGTTCGAAGTTTTCCATGCTATGAAAAATAAGCGTAAGGGGAGAAAGGGCTCCTTTGCACTCAAACTTGACATGAGCAAAGCCTACGACAGGGTTGAGTGGAATTTCTTGGAGCAAATGATGCGAAGGTTTGGGTTCAGCAGTCTCTGGATAAACAAGATTATGCACTGCCTCAACACTGTTTCTTTTTCTTTCCTCATCAATGGGAAGGCTTGTGGTAAAGTTGTCCCATCACGGGGCCTACGTCAAGGGGACCCTATTTCTCCGTATTTGTTCATCCTGTGTGCTGATGCCTTCTCCCTCATGCTCTCCAAAGCGGTTAACAGGGGCGAAATTCATGGCGTTAAAGTGTGTCGTGATGCACCACCTGTTTCCCATCTCTTTTTTGCTGATGATAGCATTTTCTTTGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_510020.p1 GENE.S_Transcript_510020~~S_Transcript_510020.p1 ORF type:3prime_partial len:323 (+),score=46.18,RVT_1|PF00078.23|9.9e-36 S_Transcript_510020:499-1464(+)
MKGIFDGFRQWKKEEVDIEKVVTDYYAELFKSSGDPNMSGVLDCVECRVTPEMNSMLDKAPTAEEIYTALNQMHSKKAPGPDGMHALFFKKFWHIVGPNVVQFANSWWKGEVSLYEANTTNIVLIPKVKDPKFITDYRPISLCNVLYKIISKTLANRLKGMLPTMISENQSAFIQGRLITDNALVAFEVFHAMKNKRKGRKGSFALKLDMSKAYDRVEWNFLEQMMRRFGFSSLWINKIMHCLNTVSFSFLINGKACGKVVPSRGLRQGDPISPYLFILCADAFSLMLSKAVNRGEIHGVKVCRDAPPVSHLFFADDSIFFA

Click here to download the sequence:
Link to NCBI Protein BLAST