Transcript Information: S_Transcript_510163.p2


Annotated TAIR IDAT5G06380.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1949632-1950072 | Forward length=146
E-Value8.1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.82308251242826
Replicate 20.22745143873727
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.2336475420242
Replicate 30.2600210763414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_510163.p2 GENE.S_Transcript_510163~~S_Transcript_510163.p2 ORF type:5prime_partial len:97 (+),score=8.89 S_Transcript_510163:1-291(+)
CACCATTGTAAACGTATTGTCTTCACTGTTTACAAAGCCCCAGTTGGGCTTTGCAGAAAAACAATACGACGACACCGAAGGCGACGGTTAGTGAAAAAAGGAATAATACCATTTCCGTCAATAACACAATCACCAACTAACTTTAAATTTGTCTCGGAATATGAAGAAATGCCAATGGATATGGTTAATGGAAGACATATGGAGACTGAATTGAAAGAACTAGAAGATGAGATGTGGGAGAGGTTCAACACAACTGGCTTTTGGAGAAGCCTTTCCCAAAAGGATACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_510163.p2 GENE.S_Transcript_510163~~S_Transcript_510163.p2 ORF type:5prime_partial len:97 (+),score=8.89 S_Transcript_510163:1-291(+)
HHCKRIVFTVYKAPVGLCRKTIRRHRRRRLVKKGIIPFPSITQSPTNFKFVSEYEEMPMDMVNGRHMETELKELEDEMWERFNTTGFWRSLSQKDT*

Click here to download the sequence:
Link to NCBI Protein BLAST