Transcript Information: S_Transcript_511406.p1


Annotated TAIR IDAT2G17890.1
Annotated Gene Namecalcium-dependent protein kinase 16
Annotated Gene Symbol(s)CPK16
Annotation TypeHomolog
Chromosome Positionchr2:7769885-7772627 | Reverse length=571
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_511406.p1 GENE.S_Transcript_511406~~S_Transcript_511406.p1 ORF type:3prime_partial len:88 (+),score=11.04,EF-hand_1|PF00036.28|1.8e-06,EF-hand_1|PF00036.28|4.1e-06,EF-hand_6|PF13405.2|0.02,EF-hand_6|PF13405.2|8e-07,EF-hand_8|PF13833.2|9.1e-06,EF-hand_8|PF13833.2|0.0037,EF-hand_8|PF13833.2|4.4,EF-hand_5|PF13202.2|0.065,EF-hand_5|PF13202.2|3.1e-06,EF-hand_7|PF13499.2|0.016,EF-hand_7|PF13499.2|0.00099 S_Transcript_511406:29-262(+)
ATGGACATCGACCGCAATGGCGAGATTGACTACATGGAGTTTGTCGCCGCATCAATGAGTGCGTATCAGATGAGCCACGGGCTGACACCTGCTGCGAGCAAGGCGTGGCAGCGGCGCGTGCGCATCGTCTTTGATCAGATTGACGACGACGGCAACGGCTACATCACTGCAGAGGAGCTCACCAAGCTGATGGGCACCAGTGATCAGGTGCAGGCGCTCATCAAGGAAGCTGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_511406.p1 GENE.S_Transcript_511406~~S_Transcript_511406.p1 ORF type:3prime_partial len:88 (+),score=11.04,EF-hand_1|PF00036.28|1.8e-06,EF-hand_1|PF00036.28|4.1e-06,EF-hand_6|PF13405.2|0.02,EF-hand_6|PF13405.2|8e-07,EF-hand_8|PF13833.2|9.1e-06,EF-hand_8|PF13833.2|0.0037,EF-hand_8|PF13833.2|4.4,EF-hand_5|PF13202.2|0.065,EF-hand_5|PF13202.2|3.1e-06,EF-hand_7|PF13499.2|0.016,EF-hand_7|PF13499.2|0.00099 S_Transcript_511406:29-262(+)
MDIDRNGEIDYMEFVAASMSAYQMSHGLTPAASKAWQRRVRIVFDQIDDDGNGYITAEELTKLMGTSDQVQALIKEAA

Click here to download the sequence:
Link to NCBI Protein BLAST