Transcript Information: S_Transcript_511621.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24871963771197
Replicate 20
Replicate 30.1723620194729
Condition 2: 8 Hour
Replicate 10.39860542648847
Replicate 20.20908269756754
Replicate 30.39842705803703
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_511621.p1 GENE.S_Transcript_511621~~S_Transcript_511621.p1 ORF type:3prime_partial len:107 (+),score=0.58,zf-RVT|PF13966.2|4.6e-15 S_Transcript_511621:115-432(+)
ATGAAGCATCAGCTCCAGAAATGCACTCATGGAGGCAGATTGAGCATTACGGATTACTATGACTGGCACATGGGAAACACGAATGGTAGCTATTATGCAAAGTCCATCTGGGATGCTAGTGTGGTGCCAAGGCATCGAATCATTACCTGTCTTACTGTTAGAAAATCTCTCCCGACAATTGATAACTTGACTACTAGGGGGATGCACTTGGTAAATAGGTGCCCATTATGCTGCAAGGACGCTGAAAGCCATAACTACCTATTGTTTCAATGTTGTACTGGTCACAACATCTGGCAGCGAGTGTTATGTTGGACGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_511621.p1 GENE.S_Transcript_511621~~S_Transcript_511621.p1 ORF type:3prime_partial len:107 (+),score=0.58,zf-RVT|PF13966.2|4.6e-15 S_Transcript_511621:115-432(+)
MKHQLQKCTHGGRLSITDYYDWHMGNTNGSYYAKSIWDASVVPRHRIITCLTVRKSLPTIDNLTTRGMHLVNRCPLCCKDAESHNYLLFQCCTGHNIWQRVLCWTG

Click here to download the sequence:
Link to NCBI Protein BLAST