Transcript Information: S_Transcript_512165.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.071876848948
Replicate 27.9608003558043
Replicate 310.457221490701
Condition 2: 8 Hour
Replicate 120.006294008857
Replicate 211.993155971812
Replicate 311.646803330557
Condition 3: 24 Hour
Replicate 16.0805345798561
Replicate 28.4113115128712
Replicate 310.660864129998


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_512165.p1 GENE.S_Transcript_512165~~S_Transcript_512165.p1 ORF type:5prime_partial len:97 (-),score=22.39,Transferase|PF02458.11|3.9e-16 S_Transcript_512165:73-363(-)
GGTATGTTCAGTGGAAACCCTAATCTTTGGTTTGTAAGTTGGTTAAATCTCCCAATACATGGATTGGATTTTGGTTGGGGGAAGGAGATCTTCATTGCTCCAGGATGTTACAAGTCTGATGGTGGTATCTTCATTTTTCCTGGTCCTTATGATTATGATGGATCAGTAATGGTGGCAGTGAGCTTGCAAGAGATTCATATGGAGAAGTTCAAGAAGTACTTGTATGAGGATTTGGGAGACAAAGTTTTGTCAAAACCATTATCTATCATTTTTGATAAATGTGGTAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_512165.p1 GENE.S_Transcript_512165~~S_Transcript_512165.p1 ORF type:5prime_partial len:97 (-),score=22.39,Transferase|PF02458.11|3.9e-16 S_Transcript_512165:73-363(-)
GMFSGNPNLWFVSWLNLPIHGLDFGWGKEIFIAPGCYKSDGGIFIFPGPYDYDGSVMVAVSLQEIHMEKFKKYLYEDLGDKVLSKPLSIIFDKCGK*

Click here to download the sequence:
Link to NCBI Protein BLAST