Transcript Information: S_Transcript_512481.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10785225779883
Condition 2: 8 Hour
Replicate 10.24941976979103
Replicate 20.39248857262678
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1325369098032
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_512481.p1 GENE.S_Transcript_512481~~S_Transcript_512481.p1 ORF type:internal len:171 (+),score=17.05,RVT_1|PF00078.23|2.2e-18 S_Transcript_512481:1-510(+)
AGAGAGTGGGATTTCTTAGAGAAAATCATGCTTAAACTGGGGTTTGATGCTTCTAGGGTCACAAAAGTAATGAAGTGTGTGAGAACAGTGTCCTATTCTTTTCTCATTAATGGCGAGCCTAGTGTCACGGTTGTGCCGTCCCGAGGGCTCCGTCAAGGGGACCCCCTCTCCCCTTATTTATTTTTGCTGTGTGCTGAAGGACTCTCTAGTTTGATTTCTAATGCAGTGGAATCAGGGGCGCTCAATGGTCAAAAAGTAGCTATGACGGCACCAGCTATCTCTCATCTCCTATTCGCCGATGACTCCATTCTATTTACTAAAGCGGATGAGGATCAAGCGAGGAAAGTGGCCGAAATTTTGCACTGGTACGAAGAGGCCTCGGGTCAGCAAGTGAACAAGGCAAAAACAACGGTGTCATTTAGCAAAGGGGTGCCAAGGACAAGGAGGGAGTCCATTATACAGATTCTGGGTGTTCAAGAAGTGCAAAGCCAAGATAGGTATCTTGGACTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_512481.p1 GENE.S_Transcript_512481~~S_Transcript_512481.p1 ORF type:internal len:171 (+),score=17.05,RVT_1|PF00078.23|2.2e-18 S_Transcript_512481:1-510(+)
REWDFLEKIMLKLGFDASRVTKVMKCVRTVSYSFLINGEPSVTVVPSRGLRQGDPLSPYLFLLCAEGLSSLISNAVESGALNGQKVAMTAPAISHLLFADDSILFTKADEDQARKVAEILHWYEEASGQQVNKAKTTVSFSKGVPRTRRESIIQILGVQEVQSQDRYLGL

Click here to download the sequence:
Link to NCBI Protein BLAST