Transcript Information: S_Transcript_512491.p1


Annotated TAIR IDAT3G25720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9380234-9381405 | Forward length=282
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.22768809979754
Condition 2: 8 Hour
Replicate 10.26327642366831
Replicate 20.27619566221885
Replicate 30.52631722481435
Condition 3: 24 Hour
Replicate 10
Replicate 20.27980014291787
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_512491.p1 GENE.S_Transcript_512491~~S_Transcript_512491.p1 ORF type:3prime_partial len:162 (+),score=27.01,zf-RVT|PF13966.2|3e+03,zf-RVT|PF13966.2|1.8e-05 S_Transcript_512491:3-485(+)
ATGTGTCAAGATAAAATTCATGGAGGATTTCATATAAGGGAGGTGTTGAGCTGGAACAAAAGTTTACTGATTAGATGGGTTGCAAAACTAAATGAAAATGGGAATTCACTATGGATTGAGTGGTGCAAGAAATACTACAAGAAAGAGGAGACAGTCTGGAGAACTAAAGCAAGGGAAGGTGATTCTTGGGCATGGAAATGCCTAATGGAAACCAGGGATGAGCTAGTTCAGATAGCAGGGGATACACAAAAAGCTGATAGCCTGTTGCAGGAATGGGGAGCAAGCAAGAGATCTTTTACCAATAGTGCTTATCTGAAGATCAGAGGAAATGCAAGAAAGATGGATTGGGCTAAAATAGTAGGGGACTCTATCAATGTAACTAAGCATTCTGTAATTGCTGCCTTGGCAATACACAATGGCTTGCCAACATTAGACAATATGATTAGTAGAGGTCTTCAGATGCCCAACAGGTGTAGCTTATGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_512491.p1 GENE.S_Transcript_512491~~S_Transcript_512491.p1 ORF type:3prime_partial len:162 (+),score=27.01,zf-RVT|PF13966.2|3e+03,zf-RVT|PF13966.2|1.8e-05 S_Transcript_512491:3-485(+)
MCQDKIHGGFHIREVLSWNKSLLIRWVAKLNENGNSLWIEWCKKYYKKEETVWRTKAREGDSWAWKCLMETRDELVQIAGDTQKADSLLQEWGASKRSFTNSAYLKIRGNARKMDWAKIVGDSINVTKHSVIAALAIHNGLPTLDNMISRGLQMPNRCSLC

Click here to download the sequence:
Link to NCBI Protein BLAST