Transcript Information: S_Transcript_513120.p1


Annotated TAIR IDAT3G48900.2
Annotated Gene Namesingle-stranded DNA endonuclease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18131854-18136239 | Forward length=600
E-Value8E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44355002058634
Replicate 20.36771315929191
Replicate 30.30737893472668
Condition 2: 8 Hour
Replicate 10.88855792988054
Replicate 20.37286414399544
Replicate 30.17763206337484
Condition 3: 24 Hour
Replicate 10.18204069575495
Replicate 20.37773019293912
Replicate 30.21018370337597


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_513120.p1 GENE.S_Transcript_513120~~S_Transcript_513120.p1 ORF type:5prime_partial len:120 (-),score=19.84 S_Transcript_513120:54-413(-)
AATAACATCCATTTCCATTGTACTAGTTTGACGAGCCCACCCCCAGCACCTAGCACACGTTTTCTTTCAAAATGTAAAGGCGACACAGAACCAGATTATCTACCGAACATGGATGGCATGCCAACCAAGGATGGCGGCTCAGAGGCTCGTCAAACTAGTACAATGGAAATGGATGTTATTGACCTCTTGAGTCCTCCTCAGGCACCTAGCACAGGTTTCCTTTCAAAATGTAAGGGCGACGTAAAACCAATAAGTGTTATTGATCTGAGTGGTTCAGATGTTGAAATGTCACCTGAACATGCTCAGAAGTCAAGAGAACTCAGATTGTTCCTGGCCAGCATTAGGGCAGAAATCTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_513120.p1 GENE.S_Transcript_513120~~S_Transcript_513120.p1 ORF type:5prime_partial len:120 (-),score=19.84 S_Transcript_513120:54-413(-)
NNIHFHCTSLTSPPPAPSTRFLSKCKGDTEPDYLPNMDGMPTKDGGSEARQTSTMEMDVIDLLSPPQAPSTGFLSKCKGDVKPISVIDLSGSDVEMSPEHAQKSRELRLFLASIRAEIS*

Click here to download the sequence:
Link to NCBI Protein BLAST