Transcript Information: S_Transcript_51317.p1


Annotated TAIR IDAT1G03000.1
Annotated Gene Nameperoxin 6
Annotated Gene Symbol(s)PEX6
Annotation TypeOrtholog
Chromosome Positionchr1:688057-692453 | Reverse length=941
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9215049548142
Replicate 27.2643027798953
Replicate 38.7043698335444
Condition 2: 8 Hour
Replicate 110.956163832656
Replicate 210.650003378952
Replicate 310.842617691015
Condition 3: 24 Hour
Replicate 18.0164710057226
Replicate 27.4852955665001
Replicate 38.7930063063707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51317.p1 GENE.S_Transcript_51317~~S_Transcript_51317.p1 ORF type:5prime_partial len:981 (+),score=212.96,AAA|PF00004.25|4.7e-12,AAA|PF00004.25|8.7e-47,AAA_16|PF13191.2|0.0059,AAA_16|PF13191.2|0.00039,AAA_16|PF13191.2|1.3e+02,AAA_17|PF13207.2|0.004,AAA_17|PF13207.2|0.0032,AAA_5|PF07728.10|0.011,AAA_5|PF07728.10|0.019,AAA_5|PF07728.10|6.9e+03,AAA_22|PF13401.2|0.14,AAA_22|PF13401.2|0.0075,AAA_22|PF13401.2|1.2e+03,AAA_19|PF13245.2|3.5e+03,AAA_19|PF13245.2|2.1,AAA_19|PF13245.2|0.0035,RuvB_N|PF05496.8|1.8e+02,RuvB_N|PF05496.8|1.7e+02,RuvB_N|PF05496.8|0.00026,TsaE|PF02367.13|0.23,TsaE|PF02367.13|0.087,AAA_33|PF13671.2|0.17,AAA_33|PF13671.2|0.089,AAA_18|PF13238.2|0.36,AAA_18|PF13238.2|0.1 S_Transcript_51317:1-2943(+)
TTGGCCTTTACCAGCCGCTTTGGTTATATCTTCTTCTCTCAGTCAGCTCAGCGTCTCGAGAATCGGATCACTTTCCCGCGATCAATCCAACTAAAAATTCCCCTCTCTCTCTCATTTCTGTCTCTAATGGTGGAACGAAGGAAGCCATTGGTGCTAGCTTCAACTAGAGCCTTTCTAAACTCAGTACTCCAACAAAACCAACCACCTTCTACTCAAATTGACCCAGATGTCCATCCTCTCACACCCTCTTCCTTGCCTTCTCTTCAGTTACAAGCTGGAATTCTTCGGATTTCCAAGGACAATCATGGAAACTTCCCTAATTCTCTCGACGATTCTGCTCTTGTTGGTCTCTCCACTTCTGCCCTTAAACGCCTCGCCATCACCTCCGGCTCTCTGGTGCTCATCAAGAACACCGACACCAATGCGTGGAGTATAGGCCAGGCTGTAGTTTTAGATCCCCCTCCTTCCGAAGGTCAGTTTCTGTCTGATGTTGAGGAGGGATCTTCTTGTGCATCTAATATGATGCTTGTTTTTCCTTCATTAACTTTCCCGCAAGCTCTAAACCGGCCTTTGGACAAAAAGGTTGCCTATCTCTCGCCTCTCCTCGCTTTTAATGCTCACTTGCACACCTCATGCTTGACGTCTCTCCTTCGCCATGGAAAGGAGTCTTTAGCATCTTTCTTCGATGTTAAAGAGGATTTGGAGAGAAGTGGAGGGGTGATGAAAGATTGTGTTGTCAATATAAGAGTGGAGCCTTGGCCTCTTTTGCCATGCTATGCCTCACATGTGAGAATATCTTTTGTTAAGATACCGGAGTGTGGTACCATTGAATCTCTTAGAGGAAAATCATCCATTGAAGCTATGGATCGTCAAGAAATGATTGACTTCGCATTACAAGACTATTTCAATGTTGATAGATATCTCGCTAAAGATGATATCTTCAGAGTTCAAATTATGTGGAATTGCCATTCAATTATGTGCGTCAATTGTAGCCTGAGAAAGAAGAAGAATCAATGCGATATTATTTGCTTTAAGGTTGTGGCCTTGGATCCTCCTGAGGAACCCGTTCTTCGTGTCAATCGTAAAAAAACTGCCCTTGTGCTTGGAGGAAGTGCTGCTGCTGCTGTTCCACCAGATTTATTAATCTCTGAGTCAATGGAAATTGCTCCTTTGCAGAGGAATGCCATAAAGACCTTAGGATCTATACTTACTCCTCCTTTGTGCCCATCATTACTCTCTTCCAAATTTAGAGTTGCCATTCTGTTACATGGTTTGGCAGGATCTGGTAAGAGGACTGTTGTTCGATATGTTGCTCATCGACTTGGTCTACATGTTGTAGAATATAGCTGCCATTCTCTTATGACAGGTTCTGAGAAAAAAGCATCTTCAATTCTAGCTCAGGCCTTCAGTGCAGCTCATAGATACTCTCCATCCATATTGTTACTACGTCATTTCGATGTCCTACGAAATCTGGCTACCCAGGAGGGCTCACAGTCTGATCATGCTGGTATGATTTCTGAGATTGCATCTGTTATGAGGAAATTCACACAGCCATCAGTCATGGATGAAGATATCTCTTTGGAGGAGAAATTTACTGGTGGACCTCAATTGAAGAGTGCTGAAACGATACGGCAGCATCAGCTCTTCTTAGTTGCTGCAACTGAGAGTACTGAAGGTCTGCCACCGGCCATTAGACGTTGCTTCAGCCATGAACTCAGTCTGGCTCCTTTAACTGAAGAAGAAAGAGCTGAAATGCTTTCTGGATCACTGCAAAGCATTGCTGAGATATCTGCCAATGGTGAAGTGGAGCAGGTTGTCAAAGACATAGTTGCTCAGACATCTGGATTCACGCCAAGGGATTTGCGCTCCCTAATTGCTGATGCAGGCGCTAATGTGATCCCAAAGGAAAATGTTCTGTGTGAACCTCAAAAGTCAGTTGAAAATCATTTCCATAGTGATAATAAGGTGCAGTCTAAACCTGTTGATGGCACTACCCAGAGTCCTGGAAAAGAAGACTTGACAAAAGCATTGGAGCGCTCAAAGAAAAGGAATGCTTCTGCATTGGGTGCTCCCAAGGTCCCTAATGTGAAATGGGAAGATGTTGGGGGGCTCGAAGATGTGAAGAAAGCAATCCTAGATACAGTTCAGCTACCTCTCCTGCACAAGGATTTGTTTTCTTCTGGGCTACGTAAACGTTCTGGAGTTCTTCTATATGGTCCTCCAGGCACTGGAAAGACTCTATTAGCAAAAGCTGTGGCGACAGAGTGCTCCTTGAATTTCCTTAGTGTAAAAGGACCTGAACTAATTAATATGTACATTGGAGAGTCAGAGAAAAATGTGCGTGATATATTTGAAAAGGCTCGATCTGCACGCCCCTGTGTCATTTTTTTTGATGAACTTGATTCTCTAGCACCTGCTCGAGGTGCTTCTGGTGATTCTGGGGGAGTTATGGACAGAGTAGTTTCTCAGATGCTTGCAGAGATTGATGGCCTGAATGATTCTACTCAGGACTTGTTTGTAATTGGAGCAAGCAATCGACCTGATCTTATTGACCCAGCACTTCTACGTCCTGGTCGATTTGACAAGCTCCTCTATGTTGGGGTTGTATCTGATCCATCTTACAGAGAGAGAGTTCTTAAAGCACTCACCCGAAAGTTTAAATTGCACAAAGATGTATCTCTTTACTCGATCGCGAAACAATGCCCTCCAAATTTTACTGGTGCAGATATGTATGCCTTGTGTGCAGATGCTTGGTTTCATGCTGCAAAACACCAGGTCCTAAATGTGGAATCAGATTCATCCAATGCTGATACTGAAGTTGACACCATTGTCGAACATGATGATTTTATCAAGGTGTTGGGAGAGTTAGCTCCATCTCTTTCCCTAGCAGAGCTGAGGAAGTACGAAATGCTACGAGACCAGTTTGGAGGAGGTTCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51317.p1 GENE.S_Transcript_51317~~S_Transcript_51317.p1 ORF type:5prime_partial len:981 (+),score=212.96,AAA|PF00004.25|4.7e-12,AAA|PF00004.25|8.7e-47,AAA_16|PF13191.2|0.0059,AAA_16|PF13191.2|0.00039,AAA_16|PF13191.2|1.3e+02,AAA_17|PF13207.2|0.004,AAA_17|PF13207.2|0.0032,AAA_5|PF07728.10|0.011,AAA_5|PF07728.10|0.019,AAA_5|PF07728.10|6.9e+03,AAA_22|PF13401.2|0.14,AAA_22|PF13401.2|0.0075,AAA_22|PF13401.2|1.2e+03,AAA_19|PF13245.2|3.5e+03,AAA_19|PF13245.2|2.1,AAA_19|PF13245.2|0.0035,RuvB_N|PF05496.8|1.8e+02,RuvB_N|PF05496.8|1.7e+02,RuvB_N|PF05496.8|0.00026,TsaE|PF02367.13|0.23,TsaE|PF02367.13|0.087,AAA_33|PF13671.2|0.17,AAA_33|PF13671.2|0.089,AAA_18|PF13238.2|0.36,AAA_18|PF13238.2|0.1 S_Transcript_51317:1-2943(+)
LAFTSRFGYIFFSQSAQRLENRITFPRSIQLKIPLSLSFLSLMVERRKPLVLASTRAFLNSVLQQNQPPSTQIDPDVHPLTPSSLPSLQLQAGILRISKDNHGNFPNSLDDSALVGLSTSALKRLAITSGSLVLIKNTDTNAWSIGQAVVLDPPPSEGQFLSDVEEGSSCASNMMLVFPSLTFPQALNRPLDKKVAYLSPLLAFNAHLHTSCLTSLLRHGKESLASFFDVKEDLERSGGVMKDCVVNIRVEPWPLLPCYASHVRISFVKIPECGTIESLRGKSSIEAMDRQEMIDFALQDYFNVDRYLAKDDIFRVQIMWNCHSIMCVNCSLRKKKNQCDIICFKVVALDPPEEPVLRVNRKKTALVLGGSAAAAVPPDLLISESMEIAPLQRNAIKTLGSILTPPLCPSLLSSKFRVAILLHGLAGSGKRTVVRYVAHRLGLHVVEYSCHSLMTGSEKKASSILAQAFSAAHRYSPSILLLRHFDVLRNLATQEGSQSDHAGMISEIASVMRKFTQPSVMDEDISLEEKFTGGPQLKSAETIRQHQLFLVAATESTEGLPPAIRRCFSHELSLAPLTEEERAEMLSGSLQSIAEISANGEVEQVVKDIVAQTSGFTPRDLRSLIADAGANVIPKENVLCEPQKSVENHFHSDNKVQSKPVDGTTQSPGKEDLTKALERSKKRNASALGAPKVPNVKWEDVGGLEDVKKAILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFVIGASNRPDLIDPALLRPGRFDKLLYVGVVSDPSYRERVLKALTRKFKLHKDVSLYSIAKQCPPNFTGADMYALCADAWFHAAKHQVLNVESDSSNADTEVDTIVEHDDFIKVLGELAPSLSLAELRKYEMLRDQFGGGSK*

Click here to download the sequence:
Link to NCBI Protein BLAST