Transcript Information: S_Transcript_51364.p1


Annotated TAIR IDAT4G24090.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 144 Blast hits to 142 proteins in 73 species: Archae - 3; Bacteria - 62; Metazoa - 7; Fungi - 13; Plants - 44; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12512742-12514467 | Forward length=308
E-Value9.4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.499203654125
Replicate 220.095027245628
Replicate 321.184223879812
Condition 2: 8 Hour
Replicate 133.313717846764
Replicate 236.580995748742
Replicate 333.759693774376
Condition 3: 24 Hour
Replicate 119.188073336333
Replicate 218.988598888291
Replicate 320.654809337163


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51364.p1 GENE.S_Transcript_51364~~S_Transcript_51364.p1 ORF type:5prime_partial len:370 (+),score=59.02 S_Transcript_51364:1-1110(+)
CCCAACGAAACCACGTCTGAGGCAAGACCCAGCTGTTGTGAATGTGATCCGCATAAAAAGACAATAGAGGATAAGGGAGAGAAAAACAGAAAGAAGGGGGTAAGGAAAAGAAACAGGGCTCAGTTAGTCATTGAATCAGAGCAACAGCTACTCTTTCTCAACCTCTGTTTCTGGGTGTCAAAGGAAATCGCGATGCCAATGACACAACCAGGCGCACTAGACCCAAGCATGGTCCTCTCTCTCCAACCCAAAACTCCATTCAGGATATTCTCCTTGTCAGCAGACAAAAGACGGTTATGCATAATCAGATGGCAAAGGCAATCATCCAGGTCAGCTATTTACATGGTAAAATGCAGCTCCAGCTCAGACCCAGAGGGTGGTGGGGGTGACATGAAGAATACTCTATCGGGTATGGTGGACAAAAGGGTGGAGGAATTGCTGGGAAGAGAAGAGAATAAAGAATTGCTAGATAAACTCAATAAGGCCTCTGAAAGAGTGGAGCTTGCCAGGAACCAGCTTGCTGATATTCAAAGGCAAGAACTCGAAGCCCAGCAGATGAGACTTTACATCGACCAGCTCGAAACCCGAGCCTCTGAGATAGCAGAATGCCAGCAGGAAGTGCTAGAAGCGAAAGCAATGGTTGAAGAAGCAGAGCGGTTTTTATCAATCAGCGGGGAAATCAGCAAAGATGAAGAGAGGTTGGAGTCACTGAAAGCTGCTTCCATATCCGCCTTGGTGGGCACCCTTGCTGGCCTCCCCATCTATCTTAGTAGGGTCACCAGCAGTCAGCTGCTGTTACTCCAGTTAGCAATTACATTTGCTAGCTGTGCGCTATTTGGTCTCACCTTTCGTTATGCAGTCAGAAGAGACTTGGATAATATACAACTTAAAACCGGGACATCTGCAGCATTTGCTGTTGTTAAAGGTCTTGCTACATTAAATGGAGGACCTCCACTAGAAGTGAGCTCAGCAAGCTTCTTATCGCATGCTCAGGATGTGGCATCCTTTGTAATCCAGGACCTGTTCATATTCATTTTTGCAGCAGTAAGTTTGGACTTCTGCTTTAAAATGAGGATAGTGAGTCCTTTCCCTATCGAAAGATCAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51364.p1 GENE.S_Transcript_51364~~S_Transcript_51364.p1 ORF type:5prime_partial len:370 (+),score=59.02 S_Transcript_51364:1-1110(+)
PNETTSEARPSCCECDPHKKTIEDKGEKNRKKGVRKRNRAQLVIESEQQLLFLNLCFWVSKEIAMPMTQPGALDPSMVLSLQPKTPFRIFSLSADKRRLCIIRWQRQSSRSAIYMVKCSSSSDPEGGGGDMKNTLSGMVDKRVEELLGREENKELLDKLNKASERVELARNQLADIQRQELEAQQMRLYIDQLETRASEIAECQQEVLEAKAMVEEAERFLSISGEISKDEERLESLKAASISALVGTLAGLPIYLSRVTSSQLLLLQLAITFASCALFGLTFRYAVRRDLDNIQLKTGTSAAFAVVKGLATLNGGPPLEVSSASFLSHAQDVASFVIQDLFIFIFAAVSLDFCFKMRIVSPFPIERSD*

Click here to download the sequence:
Link to NCBI Protein BLAST