Transcript Information: S_Transcript_51522.p1


Annotated TAIR IDAT3G55340.1
Annotated Gene Namephragmoplastin interacting protein 1
Annotated Gene Symbol(s)PHIP1
Annotation TypeHomolog
Chromosome Positionchr3:20515672-20517832 | Forward length=597
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15215716936217
Replicate 30.12719128333518
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.44101753665479
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51522.p1 GENE.S_Transcript_51522~~S_Transcript_51522.p1 ORF type:3prime_partial len:145 (+),score=18.78,RRM_1|PF00076.18|41,RRM_1|PF00076.18|1e-11,RRM_6|PF14259.2|1.3e+03,RRM_6|PF14259.2|1.4e-09 S_Transcript_51522:94-525(+)
ATGTCATTGTATTTCTTACAGACTGAAGAGGCTGCGAAGAGAGCATTGGCCCTTGATGGATCCGACATGGGTGGTCTCTATCTGAAAATCCAACCCTACAAGGCACCAAGCACCAATAAAACAGCCACAACAGACTTCTGCCCGCCAGTCCTTGTGGGTTACAACAGGATATACGCTGGAAACCTGTCATGGGATATCACAGAAGATGACTTACGAAAGCTCTTGTCCGACTGTAAAATATCAGCCATTCGATTCGGCGAAGATAAGGAGACAGGCAAATTCAAAGGGTACGCGCATGTGGACTTTGCCGACAATGTCTCTCTAACAAAGGCATTGAAACTGGATCAGATGGTGGTGTGTGACAGACCTGTGAGAATAAGGTGTGCTGTTCCTCCTAAGAAAGGCGTGGTGGTAAATTCGGGATCTGTACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51522.p1 GENE.S_Transcript_51522~~S_Transcript_51522.p1 ORF type:3prime_partial len:145 (+),score=18.78,RRM_1|PF00076.18|41,RRM_1|PF00076.18|1e-11,RRM_6|PF14259.2|1.3e+03,RRM_6|PF14259.2|1.4e-09 S_Transcript_51522:94-525(+)
MSLYFLQTEEAAKRALALDGSDMGGLYLKIQPYKAPSTNKTATTDFCPPVLVGYNRIYAGNLSWDITEDDLRKLLSDCKISAIRFGEDKETGKFKGYAHVDFADNVSLTKALKLDQMVVCDRPVRIRCAVPPKKGVVVNSGSVP

Click here to download the sequence:
Link to NCBI Protein BLAST