Transcript Information: S_Transcript_51525.p1


Annotated TAIR IDAT3G55340.1
Annotated Gene Namephragmoplastin interacting protein 1
Annotated Gene Symbol(s)PHIP1
Annotation TypeOrtholog
Chromosome Positionchr3:20515672-20517832 | Forward length=597
E-Value4.2E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0006472445042
Replicate 23.3646955752201
Replicate 33.2546004853413
Condition 2: 8 Hour
Replicate 15.5288048970345
Replicate 25.2152239748382
Replicate 35.8978489015962
Condition 3: 24 Hour
Replicate 12.4748016154921
Replicate 22.0738128239795
Replicate 31.9781995611856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51525.p1 GENE.S_Transcript_51525~~S_Transcript_51525.p1 ORF type:complete len:459 (+),score=120.23,RRM_1|PF00076.18|7.5e-14,RRM_1|PF00076.18|7.7e-10,RRM_6|PF14259.2|1.6e-12,RRM_6|PF14259.2|9.3e-08,zf-CCHC|PF00098.19|5.6e-07,Nup35_RRM_2|PF14605.2|9.6e-06,Nup35_RRM_2|PF14605.2|1.5e+03 S_Transcript_51525:198-1574(+)
ATGGTATTATCAAACAAGAAGTTGAAGCAGAAACTGAGAGCTGAGATTGCAAATATTTCAATCTCAAACAACTCTGATGTTAGCCCCACATCAATTAAGCAACTTCTAGACTCAAAAACCCCCAAACCCAGATTGTCCAAGAGAGAAAAAAAGCGCAGAAAAACCCCAACTTTAAACACCCCAAATGTGGAAACCCAACATAATAATGAAAATAAAGTTGCCCATGTTGAGGGAACAGAGAATGGAACAAAAAAGAAGAGAAAAAGAGAAACAAAGATGAGCAGTGATGAAAGGAGTGAACAAAGTATTGAGGAAAGAAAGGCAGCTAAGAGGGAGAAGAGAAAGATGAGGAGGAAAATAACGGAGGTTGGTGGTGGAGAATTGATTGTGAATGAAGAAAAGAGTGATTTGAAGAAAGAAGTGAATTTGTCTAAGAAAAAGAAGAAAAAGAAGTATAAGAAGAATAAGAAGAGCAAGGAAGGGGTGAATGGGGCAGTTGTTGAAGAGCAAAGTGCCAATGAGAATGTTGATTATACCAACAGCGAAGAGAATGCTGAACATAAAAAGAAAGTTTATGTTGGAGGCATCCCATTCTATTCAACAGAGGATGATATTCGGAGTTTCTTTGATAATTGTGGTACCATAACAGATATTGATTGCATGACATTTCCTGAGAGTGGGAAGTTCAGAGGAATTGCAATCATTAGTTTCAAGACTGAAGAGGCTGCGAAGAGAGCATTGGCCCTTGATGGATCCGACATGGGTGGTCTCTATCTGAAAATCCAACCCTACAAGGCACCAAGCACCAATAAAACAGCCACAACAGACTTCTGCCCGCCAGTCCTTGTGGGTTACAACAGGATATACGCTGGAAACCTGTCATGGGATATCACAGAAGATGACTTACGAAAGCTCTTGTCCGACTGTAAAATATCAGCCATTCGATTCGGCGAGGACAAGGGGACAGGCGAATTCAAAGGGTACGCGCATGTGGACTTTGCCGACAATGTCTCTCTAACAAAGGCATTGAAACTGGATCAGATGGTGGTGTGTGACAGACCTGTGAGAATAAGGTGTGCTGTTCCTCCTAAGAAAGGCGTGGTGGTAAATTCGGGATCTGTACCAAAATCTGGGTCTGTATCAACAGCTGTTAATGCTGAGAATAACACAGCAGATACATCTGTGAAGGCCGAGGCTGAGAATAACACAACTGAGACTGGAGATAAGAGCTCAGTTAGCTCAGGCAAGCTTCGGAGGAGGACTTGCTACGAGTGTGGGGAGAAAGGCCACATTTCCTCTGACTGCCCTAAGAAACAAGGCACTCAGGAAGCAAACTCTGGAATGATCATGTCAAAAGTATACACCTCACTCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51525.p1 GENE.S_Transcript_51525~~S_Transcript_51525.p1 ORF type:complete len:459 (+),score=120.23,RRM_1|PF00076.18|7.5e-14,RRM_1|PF00076.18|7.7e-10,RRM_6|PF14259.2|1.6e-12,RRM_6|PF14259.2|9.3e-08,zf-CCHC|PF00098.19|5.6e-07,Nup35_RRM_2|PF14605.2|9.6e-06,Nup35_RRM_2|PF14605.2|1.5e+03 S_Transcript_51525:198-1574(+)
MVLSNKKLKQKLRAEIANISISNNSDVSPTSIKQLLDSKTPKPRLSKREKKRRKTPTLNTPNVETQHNNENKVAHVEGTENGTKKKRKRETKMSSDERSEQSIEERKAAKREKRKMRRKITEVGGGELIVNEEKSDLKKEVNLSKKKKKKKYKKNKKSKEGVNGAVVEEQSANENVDYTNSEENAEHKKKVYVGGIPFYSTEDDIRSFFDNCGTITDIDCMTFPESGKFRGIAIISFKTEEAAKRALALDGSDMGGLYLKIQPYKAPSTNKTATTDFCPPVLVGYNRIYAGNLSWDITEDDLRKLLSDCKISAIRFGEDKGTGEFKGYAHVDFADNVSLTKALKLDQMVVCDRPVRIRCAVPPKKGVVVNSGSVPKSGSVSTAVNAENNTADTSVKAEAENNTTETGDKSSVSSGKLRRRTCYECGEKGHISSDCPKKQGTQEANSGMIMSKVYTSLN*

Click here to download the sequence:
Link to NCBI Protein BLAST