Transcript Information: S_Transcript_51530.p1


Annotated TAIR IDAT3G55340.1
Annotated Gene Namephragmoplastin interacting protein 1
Annotated Gene Symbol(s)PHIP1
Annotation TypeHomolog
Chromosome Positionchr3:20515672-20517832 | Forward length=597
E-Value4E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1987838394225
Replicate 21.5901109591002
Replicate 31.4399733879087
Condition 2: 8 Hour
Replicate 12.1773671795271
Replicate 22.4857609599696
Replicate 32.240404402926
Condition 3: 24 Hour
Replicate 10.72160275794756
Replicate 20.95283291912572
Replicate 30.60593500072351


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51530.p1 GENE.S_Transcript_51530~~S_Transcript_51530.p1 ORF type:3prime_partial len:333 (-),score=93.81,RRM_1|PF00076.18|4.5e-14,RRM_1|PF00076.18|9.1e-12,RRM_6|PF14259.2|9.7e-13,RRM_6|PF14259.2|1.2e-08,Nup35_RRM_2|PF14605.2|5.9e-06,Nup35_RRM_2|PF14605.2|8.7e+02,RRM_7|PF16367.1|3.2e+03,RRM_7|PF16367.1|0.11,RRM_7|PF16367.1|0.54 S_Transcript_51530:2-997(-)
ATGAGCAGTGATGAAAAGAATGAAGAAAGTATTGAGGAAAGAAAGGCAGCTAAGAGGGAGAAGAGAAAGATGAGGAGGAAAATAAAGGAGGATGGTGGTGGAGAATTGGTTGTGAATGAAGAAAAGAGTGATTTGAAGAAAGAAGTGAATTTGTCTAAGAAAAAGAAGAAAAAGAAGTATAAGAAGAATAAGAAGAGCAAGGAAGGTGTGAATGGGGCAGTTGTAGAAGAGCAAAGTGTCAATGAGAATGTTGATTATACCAACAGCGATGACAGTGCTGAACATAAAAAGAAAGTTTATGTTGGAGGCATCCCATTTTATTCAACAGAGGATGATATTCGGAGTTTCTTTGATAATTGTGGTACCATAACAGATATTGATTGCATGACATTTCCTGAGAGTGGGAAGTTCAGAGGAATTGCAATCATTAGTTTCAAGACTGAAGAGGCTGCGAAGAGAGCATTGGCCCTTGATGGATCCGACATGGGTGGTCTCTATCTGAAAATCCAACCCTACAAGGCACCAAGCACCAATAAAACAGCCGCAACAGACTTCTGCCCGCCAGTCCTTGTGGGTTACAACAGGATATACGCTGGAAACCTGTCATGGGATATCACAGAAGATGACTTACGAAAGCTCTTCTCTGACTGTAAAATATCAGCCATTCGATTCGGCGAGGATAAGGAGACAGGCGAATTCAAAGGGTACGCTCATGTGGACTTTGCCGACAATGTCTCTCTAACAAAGGCATTGAAACTGGATCAGATGGTGGTGTGTGACAGACCTGTGAGAATAAGGTGCGCTGTTCCTCCTAAGAAAGGCGTAGTGGTAAATTCGGGATCTGTATCAACAGCTGTAGACAAGGCTGAGAATAACACAGCAGATACATCTGTGAAGGCCAAGGCTGAGAATAACACAACTGAGACTGGAGATAAGAGCTCAGTTAGCTCAGGCAAGCTTCGGAGGAGGACTTACTACGAGTGTGGGGAGAAAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51530.p1 GENE.S_Transcript_51530~~S_Transcript_51530.p1 ORF type:3prime_partial len:333 (-),score=93.81,RRM_1|PF00076.18|4.5e-14,RRM_1|PF00076.18|9.1e-12,RRM_6|PF14259.2|9.7e-13,RRM_6|PF14259.2|1.2e-08,Nup35_RRM_2|PF14605.2|5.9e-06,Nup35_RRM_2|PF14605.2|8.7e+02,RRM_7|PF16367.1|3.2e+03,RRM_7|PF16367.1|0.11,RRM_7|PF16367.1|0.54 S_Transcript_51530:2-997(-)
MSSDEKNEESIEERKAAKREKRKMRRKIKEDGGGELVVNEEKSDLKKEVNLSKKKKKKKYKKNKKSKEGVNGAVVEEQSVNENVDYTNSDDSAEHKKKVYVGGIPFYSTEDDIRSFFDNCGTITDIDCMTFPESGKFRGIAIISFKTEEAAKRALALDGSDMGGLYLKIQPYKAPSTNKTAATDFCPPVLVGYNRIYAGNLSWDITEDDLRKLFSDCKISAIRFGEDKETGEFKGYAHVDFADNVSLTKALKLDQMVVCDRPVRIRCAVPPKKGVVVNSGSVSTAVDKAENNTADTSVKAKAENNTTETGDKSSVSSGKLRRRTYYECGEKG

Click here to download the sequence:
Link to NCBI Protein BLAST