Transcript Information: S_Transcript_51556.p1


Annotated TAIR IDAT3G47120.1
Annotated Gene NameRNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17351334-17352769 | Reverse length=352
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.532764694122
Replicate 29.5975046428704
Replicate 38.4702340765237
Condition 2: 8 Hour
Replicate 110.274624797509
Replicate 210.429856644864
Replicate 38.8292678987704
Condition 3: 24 Hour
Replicate 19.578432449082
Replicate 210.369577566994
Replicate 38.7424763969207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51556.p1 GENE.S_Transcript_51556~~S_Transcript_51556.p1 ORF type:3prime_partial len:577 (+),score=131.28,Torus|PF16131.1|0.00035,Torus|PF16131.1|0.0014,Torus|PF16131.1|1.7e-07,zf-CCCH|PF00642.20|4.3e+03,zf-CCCH|PF00642.20|0.00017,zf-CCCH|PF00642.20|5.2e-05,zf-CCCH|PF00642.20|1.8e-05 S_Transcript_51556:317-2044(+)
ATGAGCGCAAGTAGCAGAAGAAGACATTCCAAATGGGATCATAAAGGTCCGGAAGTCTTATCTGAAAGTTTTCATGATACAGCTCCTCCACGGAAGCCTAGAGAAACTCTTTCACCAGGCAGACGCTCACATAGACATGAAAGCCGTAGCAAAGAAAGGATGATGACATGGGATCGAGAGGGGAACTGCAGGACATCCCCAGATCTTGATGAATGGACACAACCTCATCATAGACGGTCTCCTAGAAATGGTTGGGGCCAGTCGTACAGGAGCAGGAGTCGGAGCAGGAGCAGGAGTAGGAGCCCAGCTCATAACTCAAGGAGGGAGTCAGCATTAACTGAGAAGAGTAGAAGCAAATCTGGAGTTTCAGCTTCAATATGTAGGGATTATGCTGCTGGAAGATGCAGGAGGGGAAGTCATTGTCAATTTCTTCACCAAGATTCTCAACCGTACGAAAGGGGGAGGTTTGGAAGCAGTCCACCTGATGAATGGGAAGGTAAGCATCGGAGGCCTGGAGGTTCAAGATACTCCCCTGATGACACTAAAGACTATGTTAGAAGTGAAAAATCTTCACCTGTATGTAATGATTATGTGAGAGGCCAGTGTAGAAGAGGTGCTTCATGCAGATATGTGCATCATGATGGCGCAACTGATGTATTTGAGAGAGGACCTGTTGACGATGTGTATAGAGACAGGCATAACGACCGCAGAATTCGGGATACTTATTCGGATAGGAACTATGACCGTGAGCCTCCTAAGAGAGGTGAAACTCTCTGCAAATTTTTTGCTGCTGGAAATTGTCGGAATGGAAAGCGCTGCAGATTTTCTCATCAAGTTCCAGAAGACTTCAGTCCAGAGAAGCGGTCCCATGATGACAGACGGGGGCCAGAACATAAATTTGAGGGCAGCCCAGTTTGGGATGGTCCTAGATGGGATGATGCACCTAGAGCGTCAAACATTCCTGCAGTGCAGGGTTGGGAAGAAGAGAGAAATGAGATTGCAGATGTAGGAGATGAAGTTATTACAGTGAGGTCTGAGGATGATTCTTGGAGCCTCGGCATTCCCAACACGAAACAAACATGGGATGCCCCTGCTAGCATTGATAAGCCAAAGAGTAGGGATGAAGAGCAGCCCCTTCATTGGAAGTCAGAAAATAGTGTCCCTGGCATGGGTCTTTCTGCAACGAGAAGTACAGAGAATTTTTCTGGTGATATGGAGATCTCTCCGAGGGATATTCTCAAGCAGCATGACCTAAGTTCGTCAAATCCACAAACTTCATCTCTTTCTAACATTTCTTTTGCTGCTGCTCAACAAGATGCTGGTGGCGAGGCTTCATATGAGAAGCCCCACCCCTCTGGATTCCAAGAGCAGAGAGTATTTGATGATCCTTACTCTAGGCGGAATCCCAATTTTAAGGAGGAAAAACTAAATATGCATGCTGGAGAGGGTAGAAATGCCATGGTAAATTTCGATGGCTCATGCATAACTCCAAGTTTGCCATTGAATGTCCAACCAGGACCTAGTATATTCCAGAATGATCAGCGTATCAATGTTCAACCTATTGCAAGCACAAATCCTCCTGCTGGACAAGGTCAGCTGCCATTCCCCTTGAATCCTTCTGGTGGTGACAGAATGCAAACACCCACTCCAAATCCACCGGTGAATGTCCCACCAATGCAAACACCCACTCCGAATCCACTGGTAAATGTCCCGCCGATGCAAACGCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51556.p1 GENE.S_Transcript_51556~~S_Transcript_51556.p1 ORF type:3prime_partial len:577 (+),score=131.28,Torus|PF16131.1|0.00035,Torus|PF16131.1|0.0014,Torus|PF16131.1|1.7e-07,zf-CCCH|PF00642.20|4.3e+03,zf-CCCH|PF00642.20|0.00017,zf-CCCH|PF00642.20|5.2e-05,zf-CCCH|PF00642.20|1.8e-05 S_Transcript_51556:317-2044(+)
MSASSRRRHSKWDHKGPEVLSESFHDTAPPRKPRETLSPGRRSHRHESRSKERMMTWDREGNCRTSPDLDEWTQPHHRRSPRNGWGQSYRSRSRSRSRSRSPAHNSRRESALTEKSRSKSGVSASICRDYAAGRCRRGSHCQFLHQDSQPYERGRFGSSPPDEWEGKHRRPGGSRYSPDDTKDYVRSEKSSPVCNDYVRGQCRRGASCRYVHHDGATDVFERGPVDDVYRDRHNDRRIRDTYSDRNYDREPPKRGETLCKFFAAGNCRNGKRCRFSHQVPEDFSPEKRSHDDRRGPEHKFEGSPVWDGPRWDDAPRASNIPAVQGWEEERNEIADVGDEVITVRSEDDSWSLGIPNTKQTWDAPASIDKPKSRDEEQPLHWKSENSVPGMGLSATRSTENFSGDMEISPRDILKQHDLSSSNPQTSSLSNISFAAAQQDAGGEASYEKPHPSGFQEQRVFDDPYSRRNPNFKEEKLNMHAGEGRNAMVNFDGSCITPSLPLNVQPGPSIFQNDQRINVQPIASTNPPAGQGQLPFPLNPSGGDRMQTPTPNPPVNVPPMQTPTPNPLVNVPPMQTP

Click here to download the sequence:
Link to NCBI Protein BLAST