Transcript Information: S_Transcript_51566.p1


Annotated TAIR IDAT2G40070.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16728378-16731160 | Reverse length=607
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.511146737043
Replicate 234.216021093434
Replicate 323.287861664886
Condition 2: 8 Hour
Replicate 122.048284904154
Replicate 232.704609240278
Replicate 331.612485854845
Condition 3: 24 Hour
Replicate 114.71752743646
Replicate 227.753565871036
Replicate 328.855728768565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51566.p1 GENE.S_Transcript_51566~~S_Transcript_51566.p1 ORF type:complete len:236 (+),score=8.88 S_Transcript_51566:577-1284(+)
ATGTGCCCGTTCAACCTCAGCTCGAAGCACTCAAAGCACAACGCTCCTAGCCCATCTCGCGTACAGCTCACTCGTACGCTCCACTGCCCATTGCTTCACAAGAAGCTCAAGCATCACGCTGCCCATGTTCCACCCCAACTCAGGAGCAGTTCCAAGAGCGTCAAGCGCCCAAGCAACATATACAACAGCAACGCCCAGCGCATCGTCCCAGAAGCTCGTCCAACAGCTCCAAGCTTCACGTCTCAACTGCCTACACCACGTCCACAAGCAAAACGTGCAACAGCAGCTCCTCTATCACCAACTCCATCACTACACATCATCCAGCAACGTAGCACAGCTCCCTCACGCCCCATGCCCACATGTTCAAGCGTACAAACTCCATGCTCCTTGCTACGTCACAGCAGCACGTCCCAAGCTCACTACATGCAGCCCCATCATTCCACTCGAGCAAAAAGCACATCCAGGACACAAGACAAGCACGCCAGTCCACGCACTACCCACTTGCATCACCCATTCCAGCTCACTCCTCCTCGAGAAGAACACACGCCCATCATAAGCACCTCACTGTACCACTCCCAACTCACGTTCCAGCTCAGCAAAGCAGCCTCCAACTCATCACAAGTGGCTCACTGTCCCACGTCCAACTCAAGCTCCACTTACCCGACAAACTCCATCAAGGCATCCAACGCACAACCCACCATCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51566.p1 GENE.S_Transcript_51566~~S_Transcript_51566.p1 ORF type:complete len:236 (+),score=8.88 S_Transcript_51566:577-1284(+)
MCPFNLSSKHSKHNAPSPSRVQLTRTLHCPLLHKKLKHHAAHVPPQLRSSSKSVKRPSNIYNSNAQRIVPEARPTAPSFTSQLPTPRPQAKRATAAPLSPTPSLHIIQQRSTAPSRPMPTCSSVQTPCSLLRHSSTSQAHYMQPHHSTRAKSTSRTQDKHASPRTTHLHHPFQLTPPREEHTPIISTSLYHSQLTFQLSKAASNSSQVAHCPTSNSSSTYPTNSIKASNAQPTIK*

Click here to download the sequence:
Link to NCBI Protein BLAST