Transcript Information: S_Transcript_51577.p2


Annotated TAIR IDAT3G04240.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)SEC
Annotation TypeOrtholog
Chromosome Positionchr3:1114187-1120722 | Reverse length=977
E-Value8.1E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0788170296146
Replicate 25.7262201905
Replicate 37.3911728579315
Condition 2: 8 Hour
Replicate 17.9766727140421
Replicate 27.2580424976212
Replicate 39.8443418328349
Condition 3: 24 Hour
Replicate 19.6717804767516
Replicate 26.9202478095717
Replicate 39.3379324705964


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51577.p2 GENE.S_Transcript_51577~~S_Transcript_51577.p2 ORF type:5prime_partial len:262 (+),score=29.99,TPR_11|PF13414.2|4.1e-05,TPR_11|PF13414.2|2e-08,TPR_11|PF13414.2|2.8e-14,TPR_11|PF13414.2|1e-07,TPR_1|PF00515.24|28,TPR_1|PF00515.24|0.011,TPR_1|PF00515.24|1.7e-05,TPR_1|PF00515.24|1.6e-09,TPR_1|PF00515.24|81,TPR_2|PF07719.13|4.5,TPR_2|PF07719.13|0.28,TPR_2|PF07719.13|0.0015,TPR_2|PF07719.13|2.3e-08,TPR_2|PF07719.13|1.5e+02,TPR_17|PF13431.2|5.8e+02,TPR_17|PF13431.2|0.55,TPR_17|PF13431.2|0.33,TPR_17|PF13431.2|7.2e-06,TPR_17|PF13431.2|0.0028,TPR_12|PF13424.2|55,TPR_12|PF13424.2|6.6e-08,TPR_12|PF13424.2|4.1e-08,TPR_16|PF13432.2|0.0027,TPR_16|PF13432.2|5.7e-07,TPR_16|PF13432.2|6.2e-07,TPR_8|PF13181.2|2.8e+02,TPR_8|PF13181.2|7.1,TPR_8|PF13181.2|0.00094,TPR_8|PF13181.2|3.2e-05,TPR_19|PF14559.2|4.9,TPR_19|PF14559.2|0.15,TPR_19|PF14559.2|1.7,TPR_19|PF14559.2|7.1e-05,TPR_19|PF14559.2|8.1,TPR_7|PF13176.2|4.1e+02,TPR_7|PF13176.2|2e+02,TPR_7|PF13176.2|0.009,TPR_7|PF13176.2|4.1e-05,TPR_7|PF13176.2|5.3e+02,TPR_14|PF13428.2|63,TPR_14|PF13428.2|52,TPR_14|PF13428.2|0.0087,TPR_14|PF13428.2|2.9e-05,TPR_14|PF13428.2|8.1e+02,ANAPC3|PF12895.3|0.0018,ANAPC3|PF12895.3|0.45,TPR_10|PF13374.2|9.6e+03,TPR_10|PF13374.2|1.4e+02,TPR_10|PF13374.2|27,TPR_10|PF13374.2|0.0002,TPR_10|PF13374.2|1.1e+02 S_Transcript_51577:1-786(+)
GGTGAAGAAGTTAGGGTTTCGAAGATGATTTCGCTGCAAAGCGAATCGAGGCATCATCATCATCAACAACAACAACGGCATAATAATAATCAACAACAAGAACAATCGGAGCTGATTAATTCCCCCGATCTTAACTCAGATGCTTCCTCTGGCTTCTGTTTAAAGCATTTTAAGGGTTCTGATGAAACTCGTGAAGAGGAAGACATGTTACTAGGCCTTGCACACCAAATGTACAAGTCGGGCAACTATAAACAGGCTTTGGAGAACAGTAATAACGTTTATGAGAGAAACCCATTACGCACTGACAATCTCCTTCTCCTGGGTGCCATATACTATCAGCTGCATGATTTTGATATGTGCATTGCTAGAAATGAAGAAGCTATACAAATTGAGCCACACTTTGCAGAGTGTTTTGGCAACATGGCAAATGCATGGAAGGAAAAAGGAAATGTTGATCTCGCAATTCGATACTACTTGATTGCTATTGAGCTCCGTCCAAATTTTGCTGATGCCTGGTCAAATTTAGCTAGTGCTTACATGCGTAAAGGAAGACTGACTGAGGCAGCCCAATGTTGCCGCCAGGCCCTTGCGTTAAATCCTCTCTTGGTTGATGCGCATAGCAACCTTGGGAATCTGATGAAAGCACAAGGTTTATTGCAAGAAGTAAGTCTTGCATACGATCTTAGACTTATCTATCTTTTCTGTTTCTTAAAACATTGCCAATACTTGATAATCTATCCCCCAAGTATAGGTCACTCTTTTAAAGTGGCATCAAAAAATTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51577.p2 GENE.S_Transcript_51577~~S_Transcript_51577.p2 ORF type:5prime_partial len:262 (+),score=29.99,TPR_11|PF13414.2|4.1e-05,TPR_11|PF13414.2|2e-08,TPR_11|PF13414.2|2.8e-14,TPR_11|PF13414.2|1e-07,TPR_1|PF00515.24|28,TPR_1|PF00515.24|0.011,TPR_1|PF00515.24|1.7e-05,TPR_1|PF00515.24|1.6e-09,TPR_1|PF00515.24|81,TPR_2|PF07719.13|4.5,TPR_2|PF07719.13|0.28,TPR_2|PF07719.13|0.0015,TPR_2|PF07719.13|2.3e-08,TPR_2|PF07719.13|1.5e+02,TPR_17|PF13431.2|5.8e+02,TPR_17|PF13431.2|0.55,TPR_17|PF13431.2|0.33,TPR_17|PF13431.2|7.2e-06,TPR_17|PF13431.2|0.0028,TPR_12|PF13424.2|55,TPR_12|PF13424.2|6.6e-08,TPR_12|PF13424.2|4.1e-08,TPR_16|PF13432.2|0.0027,TPR_16|PF13432.2|5.7e-07,TPR_16|PF13432.2|6.2e-07,TPR_8|PF13181.2|2.8e+02,TPR_8|PF13181.2|7.1,TPR_8|PF13181.2|0.00094,TPR_8|PF13181.2|3.2e-05,TPR_19|PF14559.2|4.9,TPR_19|PF14559.2|0.15,TPR_19|PF14559.2|1.7,TPR_19|PF14559.2|7.1e-05,TPR_19|PF14559.2|8.1,TPR_7|PF13176.2|4.1e+02,TPR_7|PF13176.2|2e+02,TPR_7|PF13176.2|0.009,TPR_7|PF13176.2|4.1e-05,TPR_7|PF13176.2|5.3e+02,TPR_14|PF13428.2|63,TPR_14|PF13428.2|52,TPR_14|PF13428.2|0.0087,TPR_14|PF13428.2|2.9e-05,TPR_14|PF13428.2|8.1e+02,ANAPC3|PF12895.3|0.0018,ANAPC3|PF12895.3|0.45,TPR_10|PF13374.2|9.6e+03,TPR_10|PF13374.2|1.4e+02,TPR_10|PF13374.2|27,TPR_10|PF13374.2|0.0002,TPR_10|PF13374.2|1.1e+02 S_Transcript_51577:1-786(+)
GEEVRVSKMISLQSESRHHHHQQQQRHNNNQQQEQSELINSPDLNSDASSGFCLKHFKGSDETREEEDMLLGLAHQMYKSGNYKQALENSNNVYERNPLRTDNLLLLGAIYYQLHDFDMCIARNEEAIQIEPHFAECFGNMANAWKEKGNVDLAIRYYLIAIELRPNFADAWSNLASAYMRKGRLTEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLLQEVSLAYDLRLIYLFCFLKHCQYLIIYPPSIGHSFKVASKNC*

Click here to download the sequence:
Link to NCBI Protein BLAST