Transcript Information: S_Transcript_515850.p1


Annotated TAIR IDAT5G11100.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTD, ATSYTD, NTMC2TYPE2.2, NTMC2T2.2, SYT4
Annotation TypeHomolog
Chromosome Positionchr5:3532402-3535221 | Forward length=569
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2597870407186
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.59697146520985


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_515850.p1 GENE.S_Transcript_515850~~S_Transcript_515850.p1 ORF type:3prime_partial len:169 (+),score=24.21,C2|PF00168.26|3.3e-20 S_Transcript_515850:14-517(+)
ATGCCGACTTTAAAAGTTCTCGTAAATGAAGCCACTAACCTCTTTGGTGCTGATTTGGATGGAAAGAGCGATCCCTATTGTGTAATTAAGATCGGAGAAGGAAACCAATTTTCATCCATCGAAAAGACTCGAAAGATCTCCAACACAAGGAATCCCCAATGGAAGGAATGCTTCACTCTTAATGTAAATAACCCTCTCACTGAATGCCTCTTCCTTGAAGTTTGGAACAAAGAAACGATGAGTAAAGATGATAACTTAGGAACTGCCACCGTTCAACTCAACGACTTACAACGAGGAGTTGAAAAACAAGTCTGGGTCCAATTGCAAGGTGGAACTCATTCAGGAAATATCATTGGAAAGATTGCTCACTTAGGCAAGAAGAAAGAAGAAAGAACCAACGAAGGAAAAGTCTTCCTCGGCCTTACTGCTTTGGACTTTGGTATTGATCCCAACATTGCTCAACAACAATTTAGTGGTGGTCAAGGATTACAACATGGACAAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_515850.p1 GENE.S_Transcript_515850~~S_Transcript_515850.p1 ORF type:3prime_partial len:169 (+),score=24.21,C2|PF00168.26|3.3e-20 S_Transcript_515850:14-517(+)
MPTLKVLVNEATNLFGADLDGKSDPYCVIKIGEGNQFSSIEKTRKISNTRNPQWKECFTLNVNNPLTECLFLEVWNKETMSKDDNLGTATVQLNDLQRGVEKQVWVQLQGGTHSGNIIGKIAHLGKKKEERTNEGKVFLGLTALDFGIDPNIAQQQFSGGQGLQHGQG

Click here to download the sequence:
Link to NCBI Protein BLAST