Transcript Information: S_Transcript_515858.p1


Annotated TAIR IDAT5G54080.1
Annotated Gene Namehomogentisate 1,2-dioxygenase
Annotated Gene Symbol(s)HGO
Annotation TypeHomolog
Chromosome Positionchr5:21945920-21948070 | Forward length=461
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.42024361061933
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.21584582453664
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_515858.p1 GENE.S_Transcript_515858~~S_Transcript_515858.p1 ORF type:internal len:105 (+),score=-1.21,HgmA|PF04209.9|3.4e-39 S_Transcript_515858:2-313(+)
GACTTTGTGCGTGGCTTGTTCACGATCTGCTGCGCGGGCAGCTGTGCAGCAAAAGACGGATACGCAATACATGTGTACGCAGCAACAAAATCGATGGCAGACTGTTGCCTCGCAAACGCAGATGGCGACTTTCTCGTCGTGCCGCAGCAAGGAGCGCTGCTGGTGACCACCGAGTTCGGCTTGTTGGAAGTCAGCCCTGGTGAGATTTTTGTTGTGCAGCGGGGCATGCGCTTCTCAGTTGCGCTGCGAGATGGTCCAGCACGGGGCTACGTTCTCGAGGTCTTCGGGGGTCACTTCCAACTGCCGGGCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_515858.p1 GENE.S_Transcript_515858~~S_Transcript_515858.p1 ORF type:internal len:105 (+),score=-1.21,HgmA|PF04209.9|3.4e-39 S_Transcript_515858:2-313(+)
DFVRGLFTICCAGSCAAKDGYAIHVYAATKSMADCCLANADGDFLVVPQQGALLVTTEFGLLEVSPGEIFVVQRGMRFSVALRDGPARGYVLEVFGGHFQLPGL

Click here to download the sequence:
Link to NCBI Protein BLAST