Transcript Information: S_Transcript_51683.p1


Annotated TAIR IDAT2G15900.1
Annotated Gene NamePhox-associated domain;Phox-like;Sorting nexin, C-terminal
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:6927390-6932535 | Forward length=994
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5009946828092
Replicate 212.068896399024
Replicate 312.531148893656
Condition 2: 8 Hour
Replicate 111.747383917499
Replicate 212.173549115859
Replicate 312.355827210565
Condition 3: 24 Hour
Replicate 111.949696343223
Replicate 29.2221267834657
Replicate 310.698794267813


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51683.p1 GENE.S_Transcript_51683~~S_Transcript_51683.p1 ORF type:complete len:1042 (+),score=244.07,PXA|PF02194.11|3.1e-41,Nexin_C|PF08628.8|1.7e-29,PX|PF00787.20|3.6e-15 S_Transcript_51683:378-3503(+)
ATGAAGAAGAAGATGGAGACCATTCAGGATCTCATTGAAGAAGCTAAAATTCGGTTCCTTTGGTGGGCCATCTGTATATTCTCCATTACCTATTTCTTATCTCATACAAGTAAATCAATGTGGATGAATGTCCCAATTGCAGCTTTGATTGCGTTGTTTTTGCGCTTTCTAACGACTGAAGTAGAGCTTCGATGGAAGGTTCCACAAATCAGCAAACCTACATATCTTTCTTATTTTGAGAAAAAGCAAGTGCCAGTAAAAGATTCCCGTGTCTCTTCAATGCCTCCACCACAAAAATGGAGGAGGAAATTTGATTCACCTGTTGTGGAGGCTGCAGTTGAGGACTTTGTGGATAAAATTATACAGGACTTTGTTACAGACTTATGGTATTCAGATATAACACCTGACAAAGAAGCCCCTGAGCTGATGCGTACGATTATATTGGAGGCTCTCGGAGAAGTTGCCGGAAGAGTAAAGGAAGTGAATCTTGTTGATCTATTAACAAGGGATATAGTGGACTTGATAGGTGATCATATTGAATTGTTTAGAAGAACTCAAGCTTCTATAGGTGTGGATGTCATGGTCACTTTGTCCTCTGAAGAAAGGGACGAAAGATTGAAGCACTATCTTATGGCATCTAATAATCTCCATCCAGCACTGATATCTGCTGAGAGTGAGTACAAGGTTCTGCAGCGGCTTGTGGCTGGATTGCTAGGCGTAGTTTTGAGACCAAGAGAAGTACAGTGTCCTCTTGTGAGGTGCATTGCTCGAGAATTTGTAACTTGCTTGGTAGTGCAACCTATTCTGAATCTTGTTTCTCCAGCGTATGTCAATGAGTTGGTTGAGTTTGTTCTTCTTCACGTCAAAGACATTTTAAATGGAATGGATGGTGATGATCATCCATTCAAGACTGATCATGATCACCCTGCTCCTGAAGGAAGCGGAGAAAGCTGTGGTTCCTCATTTGGCATGCATAAAACCTCCCATGATCCTAAAACTGATTTGCTTTTAGCTGAGAAGGATCTACATAGGGAAATGGCCTTGGAGGCTTCAGAAGGCTTTGCTTCTAGTGCATCCTATACATATGGAGAATCCATGCATCCAAAGGTCGCTGATTGGGCTCGAGTACTGGATGCTGCAACTCAAAGAAGAACTGAAGTTCTTGCTCCTGATAACCTTGAAAACATGTGGGCTATAGGAAGGCATTATAAAGATAAAATCAATAAAACTGCAAAAGGGCATGCTCCTCCTCCAGAAACAGATAACAAACTGATAGTGCGTGTCCCACCGGGTTCAAGTCATATTACCCAAGTTAAAATCGGCAGTGACAATAGGACAATAGTAACTCATGGTTCTGGGAAAGGACCTTCAATGGAAATGGAGTTTATCAATCAAGTGGAAGATACTGATTTTCTCAAAGCTGATGCAAATAAAAGTAGGCTTAAGAGATCGAGCAGTACCTCTGATTTGAGAATTGAACCTGAAGAGAAAAGAGCCAATACTGGTGAAAGCAAAGGGCTTCTAATTGCAGAAGATTTTTATAGTCCTGATCTTGGAAGGCGCAGTGGTGAGCGTAAATCTAATGATGTGTCAGGCTCATTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCAGGTTCATTGATTCGTAATGATGGGTCACACTTAACCAAGCTTAAGAGTCGGGTTATAGGGGCTTACTTTGAGAAAATTGGATCCAAGTCTTTTGCTGTGTATTCAATTGCAGTGACTGATGCACAAAATAACACGTGGTTTGTAAAAAGAAGATACCGGAACTTTGAGAGATTGCACCGACATCTTAAGGATATTCCAAATTATAACCTTCATTTGCCCCCCAAAAGGATATTCTCATCCAGCACTGAAGATGCTTTTGTGCATCAGCGCTGTATCCAGCTTGATAAATATCTGCAAGATCTTTTATCAATAGCTAATGTTGCTGAACTGCATGAAGTCTGGGATTTTCTCAGTGCTTCATCGAAGAACTACTCGTTTGGAAAATCACCATCAGTGATGAAAACCCTTGCAGTCAATGTGGATGATGCTGTTGATGATATTGTACGCCAGTTCAAAGGGGTTTCAGATGGTTTAGTCCGAAAAGTTGTAGGTTCATCTTCATACCATGATGATACTCTCACAAGTGTGCCATCAAGGAACTTATCCTTGAATGAAAGTGATTTGAAGATGAATAGTTCAGTGGAGAGTTCTGTGGATACAGTTCATAACATTTCTGATAACGAGGAAACTTTTAGAGATGACAGTCATGACCATGATGCTTTAGATTCTGGTATGAAAGAAAATGGGTGGCATTCAGACAATGAATTGAACTCAAAGAGCTTTCCCCCTCGTATGGTTAAACAAATAGAAGATAGTGCACATTCATCTTCAGAAAAGATGCCAGCCTTAGAAACAAATTTCAACTTAGGTGGAGCAGCTAGCTTGCCAAATATGTCTCATCCTATTGATGATCCTGACGGTATTCCACCTGAGTGGACACCTCCTAATGTGAGTGTGCCTGTGTTGAACTTGGTTGACAAGGTCTTTCAGCTTAACAGAAGAGGCTGGATAAGGAGACAGGTCTTTTGGATCTCGAAGCAAATAATGCAATTAGTCATGGAGGATGCTATTGATGACTGGCTTCTGAGGCAGATTAACTGGCTGAGAAGAGATGATGTTGTTGCCCAAGGAATTCGGTGGGTCAAGGATATCCTGTGGCCAGATGGCAAATTCTTTCTCAAGCTAGAGATCACCGGGGGTGGACTGGATGAAATGGATTCTAAATCGTTTCAAGCTACACCTCGAGCATCCAGAAACAAATCCTCCCAACTTGGCTCTTTTGAGATGCAACTTGAGGCAGCTCGAAGAGCTAGTTATGTGAAGGAGTTCCTTTTCCATGGAGCTCCAGCACCCTTGGTTGGTTTGGTCGGCCAAAAGCAGTACAAGCGTTGTGCACGGGATATTTATTTCTTTCTTCAGTCATCAATATGCCTGAAGCAAGTTGCATATGCTGTCCTGGAGCTTTTGCTTGTGGCGATCTTTCCTGAGCTGAAGGACATTGTGGCAGATATTCATCAGACTCATACTCAACCTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51683.p1 GENE.S_Transcript_51683~~S_Transcript_51683.p1 ORF type:complete len:1042 (+),score=244.07,PXA|PF02194.11|3.1e-41,Nexin_C|PF08628.8|1.7e-29,PX|PF00787.20|3.6e-15 S_Transcript_51683:378-3503(+)
MKKKMETIQDLIEEAKIRFLWWAICIFSITYFLSHTSKSMWMNVPIAALIALFLRFLTTEVELRWKVPQISKPTYLSYFEKKQVPVKDSRVSSMPPPQKWRRKFDSPVVEAAVEDFVDKIIQDFVTDLWYSDITPDKEAPELMRTIILEALGEVAGRVKEVNLVDLLTRDIVDLIGDHIELFRRTQASIGVDVMVTLSSEERDERLKHYLMASNNLHPALISAESEYKVLQRLVAGLLGVVLRPREVQCPLVRCIAREFVTCLVVQPILNLVSPAYVNELVEFVLLHVKDILNGMDGDDHPFKTDHDHPAPEGSGESCGSSFGMHKTSHDPKTDLLLAEKDLHREMALEASEGFASSASYTYGESMHPKVADWARVLDAATQRRTEVLAPDNLENMWAIGRHYKDKINKTAKGHAPPPETDNKLIVRVPPGSSHITQVKIGSDNRTIVTHGSGKGPSMEMEFINQVEDTDFLKADANKSRLKRSSSTSDLRIEPEEKRANTGESKGLLIAEDFYSPDLGRRSGERKSNDVSGSLIRNDGSGSLIRNDGSGSLIRNDGSHLTKLKSRVIGAYFEKIGSKSFAVYSIAVTDAQNNTWFVKRRYRNFERLHRHLKDIPNYNLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAELHEVWDFLSASSKNYSFGKSPSVMKTLAVNVDDAVDDIVRQFKGVSDGLVRKVVGSSSYHDDTLTSVPSRNLSLNESDLKMNSSVESSVDTVHNISDNEETFRDDSHDHDALDSGMKENGWHSDNELNSKSFPPRMVKQIEDSAHSSSEKMPALETNFNLGGAASLPNMSHPIDDPDGIPPEWTPPNVSVPVLNLVDKVFQLNRRGWIRRQVFWISKQIMQLVMEDAIDDWLLRQINWLRRDDVVAQGIRWVKDILWPDGKFFLKLEITGGGLDEMDSKSFQATPRASRNKSSQLGSFEMQLEAARRASYVKEFLFHGAPAPLVGLVGQKQYKRCARDIYFFLQSSICLKQVAYAVLELLLVAIFPELKDIVADIHQTHTQPE*

Click here to download the sequence:
Link to NCBI Protein BLAST