Transcript Information: S_Transcript_516857.p1


Annotated TAIR IDAT5G24490.1
Annotated Gene Name30S ribosomal protein, putative
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8365690-8367178 | Forward length=308
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26881819429475
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.22065538879388
Replicate 20
Replicate 30.2547681253042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_516857.p1 GENE.S_Transcript_516857~~S_Transcript_516857.p1 ORF type:5prime_partial len:99 (+),score=18.24,Ribosom_S30AE_C|PF16321.1|9.6e-24 S_Transcript_516857:2-298(+)
CAGCTCAAGGATCTGGAGGAGGCCGTCGGCGCCGAGGACGAGGACACGGTGCTCACCAAGGTGGTGCGCACCAAGGTGTTCGAGATGCCGCCGCTGTCGGTGGAGGAGGCGATGGAGCAGCTAGTGAATGTGGACCACAACTTCTACGCCTTCAGAGACGAGAAGACCGGGGAGATGAACGTCCTGTACAAGAGGAAGGAAGGAGGCTTCGGTCTCATCGTCCCCAAGGGAGACGGTCATCTCCACAAGGAGACCATCCCCAACTCTGACCACCACCACCCCTCCCTTGCTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_516857.p1 GENE.S_Transcript_516857~~S_Transcript_516857.p1 ORF type:5prime_partial len:99 (+),score=18.24,Ribosom_S30AE_C|PF16321.1|9.6e-24 S_Transcript_516857:2-298(+)
QLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEKTGEMNVLYKRKEGGFGLIVPKGDGHLHKETIPNSDHHHPSLAA*

Click here to download the sequence:
Link to NCBI Protein BLAST