Transcript Information: S_Transcript_51704.p1


Annotated TAIR IDAT5G58140.2
Annotated Gene Namephototropin 2
Annotated Gene Symbol(s)PHOT2, NPL1
Annotation TypeOrtholog
Chromosome Positionchr5:23524771-23529993 | Forward length=915
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1107.17127524437
Replicate 2147.47484090175
Replicate 3145.5879555486
Condition 2: 8 Hour
Replicate 169.278700435659
Replicate 269.437381021249
Replicate 368.118535697648
Condition 3: 24 Hour
Replicate 1232.76018560356
Replicate 2180.72245858069
Replicate 3202.32169674158


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51704.p1 GENE.S_Transcript_51704~~S_Transcript_51704.p1 ORF type:complete len:925 (+),score=179.21,Pkinase|PF00069.21|5.3e-62,PAS_9|PF13426.2|3.6e-18,PAS_9|PF13426.2|3e-19,Pkinase_Tyr|PF07714.13|4.5e-22,PAS_3|PF08447.7|1.8e-08,PAS_3|PF08447.7|3.9e-07,PAS_3|PF08447.7|1.1e+04,PAS|PF00989.20|1.1e-07,PAS|PF00989.20|2.3e-05,PAS_4|PF08448.6|0.0043,PAS_4|PF08448.6|9.7e+03,PAS_4|PF08448.6|0.0099 S_Transcript_51704:289-3063(+)
ATGGAAGGTGGAAATAGTAGTATTAGTAGTAGTGTTAGCAATGGCTCATCATCAGGAGCTAAGAAATGGATGACATTTGAACCAAACAGTAGCATGGTCTCGAGTAATGGGGATAATAGCAAGTCCAAAAATGAGATGATGAATATTAACAATAATGAAGCAAGCATGGCTAAGAGGGCAGCAGAATGGGGGCTATCAGGAGGAGATATTGTTGCCACTAGTGTGACGGTCCGGTCGTCCGGCGAGAAGGATCGAAGCAAGAACTCATCGGAGAGATTCTCATTGGACTCAATGAGGACATCAGAAGAATCAAATTCTGGATTGTCAGAAAATTTGCCAAGAGTTTCTCAAGAACTAAAAGATGCCCTGGCAACTTTGCAACAAACTTTTGTTGTTTCTGATGCTACAAAACCTGATATTCCTATCATGTATGCTAGTAGTGGCTTCTTTACCATGACTGGCTACTCTTCCAAGGAGATTATTGGGCGTAACTGCCGTTTTTTGCAGGGACCAGAAACGGACCAGAAGGAGGTGAACAAAATAAGAGAAGCAGTCAGAAATGGAAATAGCTACTGTGGCAGACTCTTGAACTACAAGAAGGACGGTACCCCTTTCTGGAACCTTCTTACCATCACTCCTATCAAAGATGACCAGGGCCGTACCATCAAGTTCATTGGCATGCAGGTTGAGGTCAGTAAATATACCGAAGGCATAGTTGACAAGGCACTGCGTCCTAATGGCTTACCTCAGTCATTAATCCGTTATGATGCTCGTCAGAAGGAGAAGGCTTTGGGCTCCATTATAGAGGTAGTTCAGACTGTAAAGGATCCACGATCACACATTCAATCTGCGAGTAACAATGAAGCTAACAAGCAGGAGGCTCAGGGGAAGTTTGACCTCGATTATATGCTGCCGCAATCTGCTGAAATTGACAGTGTGGCAGATTCTGATAGACAGACTCCTCAGTCTGACAAAAAAGGTGATGCTTCTCTTAGAGATGTGGAGAAGAGCTCCAGAAAATCTGCACGGATTTCGTTAATGGGGCTTAAAGGGAGGTCTTCTGCAAAACATGAACGTGAGCCAAGTTTGGAGCCAGAAGTTCTGCTGACAAGTACTATAGAACGTGTTGACAGCTGGGAACGTGCAGAAAGAGAAAGGGACATACGTCAAGGAATTGACCTAGCTACTACACTGGAGCGGATTGAAAAAAATTTTGTGATAAGTGATCCCAGGCTTCCAGATAATCCAATTATATTTGCATCTGACAGCTTTCTTGAATTAACAGAGTATACACGGGAAGAAATTTTGGGAAGAAACTGTCGATTCCTCCAGGGACCAGAAACAGATCAGGCCACTGTCCAAAAAATAAGAGATGCTATTAAGGAACAGCGAGAAATTACCGTCCAGTTGATTAATTATACTAAAAGTGGGAAGAAGTTCTGGAACTTGTTTCATTTGCAGCCCATGAAAGACCAAAAGGGGGAGTTGCAATACTTTATTGGTGTGCAGCTAGATGGAAGTGATCATATTGAACCATTACATAATCGCTTGTCAGAAAACACTGAGCAACAAAGTGCGAAACTGGTCAAAGCTACTGCAGATAATGTTAATGAAGCCGTGAAAGAACTCCCCGATGCCAACTTGCGGCCAGAAGACCTGTGGGCTATTCATTCCCAACTTGTATATCCAAAGCCCCATAAGAGGGACTCCTCATCTTGGAAAGCAATACAAAAGATTACCGCCAAAGGTGAAAATATTGGCTTAGATCATTTCAAACCCATAAAACCCCTGGGTTGCGGTGATACTGGCAGCGTGCATTTGGTGGAGCTGAAAGGCACAGGAGAATTGTTTGCTATGAAGGCAATGGACAAATCTGTGATGTTGAACCGTAACAAGGTTCACCGAGCTTGCATCGAAAGGGAAATCATCTCCTTTTTGGATCATCCTTTTCTTCCTACTCTATATGCTTCCTTCCAGACATCTACACACGTTTGTTTGATAACGGACTTTTGCCCTGGAGGAGAGTTGTTTGCTTTGCTTGACAGGCAGCCTATGAAGATATTGAGAGAGGAATCGGCAAGGTTCTATGCGGCTGAGGTTGTAATTGGGCTGGAATATCTTCATTGTTTAGGTATCATATACCGTGACTTGAAGCCTGAAAATATACTACTGCAGAAGGATGGTCATCTTGTTTTGACTGACTTTGACCTCTCCTTTTTGACATCATGCGAACCACGAATAATAAAGCATTCTCAGCCAAAGAAAAGACGATCAAGGAGTCAACCACCGCCAACATTTTTTGCAGAACCAGCTAGCCAATCAAATTCATTTGTTGGAACTGAAGAATACATTGCTCCTGAAATTATTACTGGAGCAGGCCATACTAGCGCTATCGATTGGTGGGCCCTAGGCATTTTGCTGTACGAGATGCTCTATGGACGTACTCCCTTTCGAGGAAAGAATAGACAGAAGACATTTGCGAACATATTGCACAAAGACCTTACCTTTCCAAGCAGCATTCAGGTAAGCCTTGCAGCAAGACAGTTGATCCATGCACTATTAAACAGAGATCCTGCAAGCAGGTTGGGATCCCAAGGTGGAGCTGATGAGATAAAACAACACCCATTTTTCCGTGGAATAAACTGGCCTCTAATCCGCTGCATGAAACCTCCACAATTGGATGTACCTATTCAGTTGATTGAAAAAGATTTGCATGCGAAAGATATTAATTGGGATGATGATGGAGTCCTTGATACTCCAATGGATCTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51704.p1 GENE.S_Transcript_51704~~S_Transcript_51704.p1 ORF type:complete len:925 (+),score=179.21,Pkinase|PF00069.21|5.3e-62,PAS_9|PF13426.2|3.6e-18,PAS_9|PF13426.2|3e-19,Pkinase_Tyr|PF07714.13|4.5e-22,PAS_3|PF08447.7|1.8e-08,PAS_3|PF08447.7|3.9e-07,PAS_3|PF08447.7|1.1e+04,PAS|PF00989.20|1.1e-07,PAS|PF00989.20|2.3e-05,PAS_4|PF08448.6|0.0043,PAS_4|PF08448.6|9.7e+03,PAS_4|PF08448.6|0.0099 S_Transcript_51704:289-3063(+)
MEGGNSSISSSVSNGSSSGAKKWMTFEPNSSMVSSNGDNSKSKNEMMNINNNEASMAKRAAEWGLSGGDIVATSVTVRSSGEKDRSKNSSERFSLDSMRTSEESNSGLSENLPRVSQELKDALATLQQTFVVSDATKPDIPIMYASSGFFTMTGYSSKEIIGRNCRFLQGPETDQKEVNKIREAVRNGNSYCGRLLNYKKDGTPFWNLLTITPIKDDQGRTIKFIGMQVEVSKYTEGIVDKALRPNGLPQSLIRYDARQKEKALGSIIEVVQTVKDPRSHIQSASNNEANKQEAQGKFDLDYMLPQSAEIDSVADSDRQTPQSDKKGDASLRDVEKSSRKSARISLMGLKGRSSAKHEREPSLEPEVLLTSTIERVDSWERAERERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIKEQREITVQLINYTKSGKKFWNLFHLQPMKDQKGELQYFIGVQLDGSDHIEPLHNRLSENTEQQSAKLVKATADNVNEAVKELPDANLRPEDLWAIHSQLVYPKPHKRDSSSWKAIQKITAKGENIGLDHFKPIKPLGCGDTGSVHLVELKGTGELFAMKAMDKSVMLNRNKVHRACIEREIISFLDHPFLPTLYASFQTSTHVCLITDFCPGGELFALLDRQPMKILREESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHLVLTDFDLSFLTSCEPRIIKHSQPKKRRSRSQPPPTFFAEPASQSNSFVGTEEYIAPEIITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIQVSLAARQLIHALLNRDPASRLGSQGGADEIKQHPFFRGINWPLIRCMKPPQLDVPIQLIEKDLHAKDINWDDDGVLDTPMDLF*

Click here to download the sequence:
Link to NCBI Protein BLAST