Transcript Information: S_Transcript_51717.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.15872510473032
Replicate 30
Condition 2: 8 Hour
Replicate 10.61368029689591
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.15715743518413
Replicate 20.32609800829277
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51717.p1 GENE.S_Transcript_51717~~S_Transcript_51717.p1 ORF type:3prime_partial len:139 (-),score=14.02,zf-RVT|PF13966.2|2e-06,zf-RVT|PF13966.2|3.7e+03 S_Transcript_51717:3-416(-)
ATGCTGCAACGGCGACGTCCAGGGTGGTGCCTCTCTCCTGATGTTTGTGTGATGTGTGGGGTGGGTGGTGAGTCAGCTTCTCACTTATTTTTGCATTGCAAACTGGCGCGGGCTCTTTGGGCCAAACTCTTTGGTGTGAAGGGGGAAGTGTTGGTGTTCCCCGCGACAATCCTTGAGTTTCTGCAGATCCTTCATGCGGGCTTTGCGAGGGTTAAGGAGTTGCGGATCCTTTGGAGGAACGCTCGGCTAGCTGTTTTGTGGTGTATCTGGTTGGAGCGTAATCCTAGGGTGTTTTCCAATACTTCTTTATCGCTGGAATTACTTTGGGAGCGGGTCACTTTCTTGGCCACCTTGTGGAGTAAGGTGGCTGGAGCTTTTCATAGTTACACTATGAGCGGGGTTCAACATAATTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51717.p1 GENE.S_Transcript_51717~~S_Transcript_51717.p1 ORF type:3prime_partial len:139 (-),score=14.02,zf-RVT|PF13966.2|2e-06,zf-RVT|PF13966.2|3.7e+03 S_Transcript_51717:3-416(-)
MLQRRRPGWCLSPDVCVMCGVGGESASHLFLHCKLARALWAKLFGVKGEVLVFPATILEFLQILHAGFARVKELRILWRNARLAVLWCIWLERNPRVFSNTSLSLELLWERVTFLATLWSKVAGAFHSYTMSGVQHNW

Click here to download the sequence:
Link to NCBI Protein BLAST