Transcript Information: S_Transcript_517292.p1


Annotated TAIR IDAT4G09775.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:6156629-6157054 | Forward length=141
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17059616176398
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.14340928615209
Replicate 30.13664004874988
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16167977182767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_517292.p1 GENE.S_Transcript_517292~~S_Transcript_517292.p1 ORF type:3prime_partial len:156 (+),score=35.33,RVT_3|PF13456.2|1.3e+04,RVT_3|PF13456.2|1.6e-14 S_Transcript_517292:56-466(+)
ATGGCCAATGAGAAGGTTGAGAGCCAGGTATTAAACTTACCTGTCATTTGGAGGCCCCCTGAAAGTGGGCATTGGAAATTAAATACAGATGCAGGCAAACTGGGTGAGAGGAGTTTCGGCTGGGGTTTTGTAGTAAGAGACTCTATCGGAGATATAGTGGCAATGGGATGTCATCAGGAGCAGGGAGATTTTGATGCTGAGTTTGAAGAGGCGAGGGCACTTCTGTTTGGTCTTCGCGCATCATGGGAAGCTGGCTATCGATCACTTGTTGCAGAGTCTGACTGCTTGAGCATCATCAGTAAGCTCAAGAAGAAGACCGCTATAAGAGCTGAGCTTGGATTTGTTCTGGATGAAATTATTAAATTTTCTTCTTCTTTTGATTTTATTTCTTGGTCTTATGTACGTAGGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_517292.p1 GENE.S_Transcript_517292~~S_Transcript_517292.p1 ORF type:3prime_partial len:156 (+),score=35.33,RVT_3|PF13456.2|1.3e+04,RVT_3|PF13456.2|1.6e-14 S_Transcript_517292:56-466(+)
MANEKVESQVLNLPVIWRPPESGHWKLNTDAGKLGERSFGWGFVVRDSIGDIVAMGCHQEQGDFDAEFEEARALLFGLRASWEAGYRSLVAESDCLSIISKLKKKTAIRAELGFVLDEIIKFSSSFDFISWSYVRRE

Click here to download the sequence:
Link to NCBI Protein BLAST