Transcript Information: S_Transcript_517296.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.47807786650025
Replicate 20.13211251232045
Replicate 30
Condition 2: 8 Hour
Replicate 10.25539389601357
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.13080768557242
Replicate 21.0856915725196
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_517296.p1 GENE.S_Transcript_517296~~S_Transcript_517296.p1 ORF type:3prime_partial len:167 (+),score=23.12,RVT_1|PF00078.23|5.2e-22 S_Transcript_517296:328-825(+)
ATGAAAGAGGCAATATTTCTCCCCGAGAAAATTGATATCCACAAATCCTATGATACATTGAGCTGGGATTTTATCAGGAATATGTTGGGATATCTAGAGTTCCTTGAGGAGTTTATTGGATGGGTCATGATCTGTATTACTTCCTCCAGATTTTCTGTGAGTATTAATGGCACGCCTAAAGGTTATTTTGCAAGGAAGTGTAGTTTAAGGCAAGGAGACCCTGTTTCTCCTTATATCTTTGTTATGTGTATGGAGGGTTATTCTAGAATGATGAGGGTTGTTGGGGACATTAGAAATTTCTCTTTTCATCGCAAGACTATAAGGGTGAAGGTGAATCATATCACATTTGCTGATGATTTACTTATCTTTACTAGAGGGGATGTGCCTTCTATGTCTATTGCTATGGAATGTCTAAATTCCTTCTCTTGTATGTCTGGTCTGTTTATCAACCCTGCTAAATTTGAGGTGAATCTGGGAGAGTTTTCTGTAGAGATCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_517296.p1 GENE.S_Transcript_517296~~S_Transcript_517296.p1 ORF type:3prime_partial len:167 (+),score=23.12,RVT_1|PF00078.23|5.2e-22 S_Transcript_517296:328-825(+)
MKEAIFLPEKIDIHKSYDTLSWDFIRNMLGYLEFLEEFIGWVMICITSSRFSVSINGTPKGYFARKCSLRQGDPVSPYIFVMCMEGYSRMMRVVGDIRNFSFHRKTIRVKVNHITFADDLLIFTRGDVPSMSIAMECLNSFSCMSGLFINPAKFEVNLGEFSVEIQ

Click here to download the sequence:
Link to NCBI Protein BLAST