Transcript Information: S_Transcript_517820.p1


Annotated TAIR IDAT3G28880.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10892435-10895895 | Forward length=772
E-Value1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.078504428422361
Replicate 20.065081975095914
Replicate 30.10880670255812
Condition 2: 8 Hour
Replicate 10.25162702439095
Replicate 20.065993653804503
Replicate 30.06287860650437
Condition 3: 24 Hour
Replicate 10.064439184338036
Replicate 20.26741960562062
Replicate 30.14880262185909


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_517820.p1 GENE.S_Transcript_517820~~S_Transcript_517820.p1 ORF type:internal len:339 (+),score=56.07,Ank_4|PF13637.2|0.00011,Ank_4|PF13637.2|5.9e-06,Ank_4|PF13637.2|0.18,Ank_2|PF12796.3|1.4e-06,Ank_2|PF12796.3|3.6e-09,Ank_2|PF12796.3|4.8e+03,Ank_5|PF13857.2|1.5e+04,Ank_5|PF13857.2|0.65,Ank_5|PF13857.2|0.00071,Ank_5|PF13857.2|0.0041,Ank_3|PF13606.2|10,Ank_3|PF13606.2|5.1,Ank_3|PF13606.2|0.04,Ank_3|PF13606.2|0.25,Ank|PF00023.26|9e+03,Ank|PF00023.26|1.4,Ank|PF00023.26|6.8,Ank|PF00023.26|7.3,Ank|PF00023.26|0.21 S_Transcript_517820:1-1014(+)
CTAATGGTGGCGGCCGAGAAGGTTAACGGATCGGTCTTAGAGCTCCGAACCGATGCCGAGTTAGCGGCCGAGAAGACGACGGTGTACAACTGCGTGACCAGAGAGGCCATCTCCGTGTTCGGACGAATGAAGAAAGATACTAGTACTAATGATAATGATATTGAGAGGAGGAAACTGCTACTTAAAGAGATGGAGCTGCTACATTTCTTTGGGGCGTCACCTAGTACCAGCTGTGGGGACAAGAAAGTCACATCTCCTCTTATTCTTGCTTCCCAGGTTGGAGATGAAGCAGTGGTGAAGCTACTACTGAAGACAGACATAGATGTAAATGATGCTGACGCCGAGGGTAATTCTGCCCTTCATTGGTCTCTTAAAGTGTGTAAAGTGCCAAACCCAGAGCATATCAGGATCATGTGCCTTCTACTGAAGCATGGTGCTCGAGTGAGGCAAAAGAATATGCTGGGATTAACTGCAGTTCACATAGCTGCCAGTAATGGAAATTTCCAAGCACTTGAGATTCTACTATTACAGGACCCTGACAGTGTCTACATGACATCAGAGCTCAAAGAAACTCCTCTTTTTTCGGCAGTAAAGAATGACTCTATAGAGTGTGCTCAACTTCTACTACGTTTCGGAGCAACCACAGATGTCCATAACTTGCGTCGAGAACGTCCTATAGATGTGGCAAAATCACAAGACATGCGCTCTGCTTTAAGCTGCACCAGTATTATCATAACCAGTAGGGCCTCCCAACAAAAATACACTGCACGTGTAAACAATGATGAAGTTATCTCAGAAACCTGTGAGATGCTTCTAAAGGAAGCATACCCTTCATCTGAGAGTGCTGGCTCAAGTGGAGACAGTGAAATCTGCAAATACTACGCATCACCAACAGGATGTGTTAGAGGGTCTAAGTGCTTCTACAAGCATGGTGAAGAGGAAACCTCCAATTTGAAATCAAGAGTGGGCTTTGTCCGTTCTGTAGCTCTAGAGGAATTCAAGCGAAAGATCTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_517820.p1 GENE.S_Transcript_517820~~S_Transcript_517820.p1 ORF type:internal len:339 (+),score=56.07,Ank_4|PF13637.2|0.00011,Ank_4|PF13637.2|5.9e-06,Ank_4|PF13637.2|0.18,Ank_2|PF12796.3|1.4e-06,Ank_2|PF12796.3|3.6e-09,Ank_2|PF12796.3|4.8e+03,Ank_5|PF13857.2|1.5e+04,Ank_5|PF13857.2|0.65,Ank_5|PF13857.2|0.00071,Ank_5|PF13857.2|0.0041,Ank_3|PF13606.2|10,Ank_3|PF13606.2|5.1,Ank_3|PF13606.2|0.04,Ank_3|PF13606.2|0.25,Ank|PF00023.26|9e+03,Ank|PF00023.26|1.4,Ank|PF00023.26|6.8,Ank|PF00023.26|7.3,Ank|PF00023.26|0.21 S_Transcript_517820:1-1014(+)
LMVAAEKVNGSVLELRTDAELAAEKTTVYNCVTREAISVFGRMKKDTSTNDNDIERRKLLLKEMELLHFFGASPSTSCGDKKVTSPLILASQVGDEAVVKLLLKTDIDVNDADAEGNSALHWSLKVCKVPNPEHIRIMCLLLKHGARVRQKNMLGLTAVHIAASNGNFQALEILLLQDPDSVYMTSELKETPLFSAVKNDSIECAQLLLRFGATTDVHNLRRERPIDVAKSQDMRSALSCTSIIITSRASQQKYTARVNNDEVISETCEMLLKEAYPSSESAGSSGDSEICKYYASPTGCVRGSKCFYKHGEEETSNLKSRVGFVRSVALEEFKRKIF

Click here to download the sequence:
Link to NCBI Protein BLAST