Transcript Information: S_Transcript_517853.p1


Annotated TAIR IDAT5G13770.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4445461-4447290 | Forward length=609
E-Value5E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.48010732946361
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_517853.p1 GENE.S_Transcript_517853~~S_Transcript_517853.p1 ORF type:internal len:91 (+),score=14.24,PPR|PF01535.16|0.00021,PPR|PF01535.16|0.1,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.8,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.1 S_Transcript_517853:3-272(+)
AAGTTAAGAGGTCCAACATGTTTAGCTCAGATATATGAGATTCTGTGTGAGTCATTAGCGAGGTGTGGAAGAGCTTCTGAAGCACTTGATTACTTTAGAGAGATGACTAAGAAAGGGATTTCTGAATACTCAATTTACTCTAAATTGATATACTCTTTTGCGAGTTTGGGCGAGGTTGATGTGGCTGAGGAACTTGTAAGAGAAGCTAAAGGAAAAACGACGATAAAGGACCCTGAGGTCTATTTAAAGCTTGTGCATATGTATATTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_517853.p1 GENE.S_Transcript_517853~~S_Transcript_517853.p1 ORF type:internal len:91 (+),score=14.24,PPR|PF01535.16|0.00021,PPR|PF01535.16|0.1,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.8,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.1 S_Transcript_517853:3-272(+)
KLRGPTCLAQIYEILCESLARCGRASEALDYFREMTKKGISEYSIYSKLIYSFASLGEVDVAEELVREAKGKTTIKDPEVYLKLVHMYIE

Click here to download the sequence:
Link to NCBI Protein BLAST