Transcript Information: S_Transcript_51788.p1


Annotated TAIR IDAT5G20110.1
Annotated Gene NameDynein light chain type 1 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6791542-6793253 | Reverse length=209
E-Value5E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4254379374597
Replicate 28.5361983407051
Replicate 38.6175879914443
Condition 2: 8 Hour
Replicate 16.1564370856009
Replicate 25.3932135113627
Replicate 36.6612023765567
Condition 3: 24 Hour
Replicate 18.3218603773692
Replicate 210.185224845323
Replicate 36.2304454929305


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51788.p1 GENE.S_Transcript_51788~~S_Transcript_51788.p1 ORF type:5prime_partial len:336 (+),score=61.65,Dynein_light|PF01221.14|2.3e-24 S_Transcript_51788:3-1010(+)
CAATACAAGTCAAAAATTCCATTCTTCCCCATTATTCACTTTCTTCTCCTCTCTACCTCAACTCAAAGCGGTGCTCTTTTGAACAAAATTCACCAACTTCCCCCACAACCTCCATATTACTACTTCTCAACAAACCCTAATCAATTTCTTTCAAAAATCTCTCACTTTCTCTTTCTAACCCCAAAAATGGCGCATCATAACAACAACCATAACCGGCGGAGCTTAGGTGCTTCAACAGACCCACAAATTTCAAAACCCATAATGGATCTCACCGGCAAAAGGCACCCCAAGTCCACCACAGCTGCCACCACTTCAGCTGTTTATAACCTCACCAATCACTTCACTAGACTAAACCCCAACAACAATAAAAACAACACAAAACCAACAACAACAAAAACCCCAAACCCACAACCCCAACCAAAAGTTATAGACACCCATTTGCAAGTTAAGGCCCTAGCAAAATCAGTGAACTTAGAGCCAAGAGTTGGTAAACATGGAAAAAGGGTAGTTTTGGAAAGTGACAAGAAGTCATTAGTGGTTGTTGAGAATAGGAAAGACAGTGTTGTAACTGTAAGTGGAGGAGGTGGTGGTGGTACCACTATCAAGGCTAAGAAAGTTGAGAAGGGAAATGAAATCATCAAACCAACAAGTATAACTACAACAATGGGAAAAAGAAGGTCATTTTGTGATGTTCAAGTGGAGTTATCTAACTTCATGTTAACAAATTGTGCAAAAGTTGTATCTGCTGATATGCCCCCTTTGGTTCAGATCCATGCTGTTGGTTTTGCTAGAAAGACTAAAGATAGCCTTGAGAAATTCACTTCTAAATCCCTTGCTCTTTCCCTCAAAAAGGAATTTGATGGTGTTTATGGACCTGCTTGGCATTGTATTGTAGGGACCAGTTTTGGGTCTTTTGTGACTCACTCTGTTGGGGGATTTCTGTATTTTTCATTGGATCAGAAGATGTATATCCTCTTATTTAAGACTTCTGTACAGAGAGCAGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51788.p1 GENE.S_Transcript_51788~~S_Transcript_51788.p1 ORF type:5prime_partial len:336 (+),score=61.65,Dynein_light|PF01221.14|2.3e-24 S_Transcript_51788:3-1010(+)
QYKSKIPFFPIIHFLLLSTSTQSGALLNKIHQLPPQPPYYYFSTNPNQFLSKISHFLFLTPKMAHHNNNHNRRSLGASTDPQISKPIMDLTGKRHPKSTTAATTSAVYNLTNHFTRLNPNNNKNNTKPTTTKTPNPQPQPKVIDTHLQVKALAKSVNLEPRVGKHGKRVVLESDKKSLVVVENRKDSVVTVSGGGGGGTTIKAKKVEKGNEIIKPTSITTTMGKRRSFCDVQVELSNFMLTNCAKVVSADMPPLVQIHAVGFARKTKDSLEKFTSKSLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKMYILLFKTSVQRAE*

Click here to download the sequence:
Link to NCBI Protein BLAST