Transcript Information: S_Transcript_517885.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.65160724193379
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.44007401119121
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_517885.p1 GENE.S_Transcript_517885~~S_Transcript_517885.p1 ORF type:5prime_partial len:103 (+),score=13.35,RVT_1|PF00078.23|8e-19 S_Transcript_517885:1-309(+)
CCTACCTACATTGGGTTTCCTAAGGAGTTTGTGGACAGGATTATGTCTTGTATAAGCACAGCTCAGTTTTTTGTGAAAATCAATGGAGGTTTGAGAGGGTTCTTCAAAGGTGGATGTGGCTTGAGGCAAGGTGACCCAATGTCTCCTTACCTCTTTGTACTTTTCATGGAAGTTCTTTCTAGGATGTTGAGGAAATGCTTTTTACATAAATATTTTTATCCTCATCCCAAATGTCATAGAGTTAATCTAAATCATTTGGCCTTTGCGGATGACTTGTTATTGTTCTGCCAAGGAGATAGGGGTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_517885.p1 GENE.S_Transcript_517885~~S_Transcript_517885.p1 ORF type:5prime_partial len:103 (+),score=13.35,RVT_1|PF00078.23|8e-19 S_Transcript_517885:1-309(+)
PTYIGFPKEFVDRIMSCISTAQFFVKINGGLRGFFKGGCGLRQGDPMSPYLFVLFMEVLSRMLRKCFLHKYFYPHPKCHRVNLNHLAFADDLLLFCQGDRGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST