Transcript Information: S_Transcript_517939.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57232260720818
Replicate 20.71170288895209
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.48111502451025
Replicate 30.22920266241915
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.54240955709927


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_517939.p2 GENE.S_Transcript_517939~~S_Transcript_517939.p2 ORF type:complete len:93 (+),score=7.05,zf-RVT|PF13966.2|5.3e-10,zf-RVT|PF13966.2|1.5e+04 S_Transcript_517939:966-1244(+)
ATGTGGATCTGGCTGCTCAAAAAGCATCATACTGCTGATAGATTGAACACTTGGGGTATAAATTGTGGCTTGAAATGCAGATTGTGTACACAGGGGGATGAAAGCCATGAGCATCTTATGTTCGAATGCTCATATACCAGGACATCTCGAGATATGCTCAGGCTAAACTCAAAATTGCTATTGATGGAGAGATTAAATAGAGAAGTTGGGCAGAAGGCCTGCAGTGGCGGACTCATAAAAGTAAGGGGAAAGGAGGTACCCAGATGCTCTTCAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_517939.p2 GENE.S_Transcript_517939~~S_Transcript_517939.p2 ORF type:complete len:93 (+),score=7.05,zf-RVT|PF13966.2|5.3e-10,zf-RVT|PF13966.2|1.5e+04 S_Transcript_517939:966-1244(+)
MWIWLLKKHHTADRLNTWGINCGLKCRLCTQGDESHEHLMFECSYTRTSRDMLRLNSKLLLMERLNREVGQKACSGGLIKVRGKEVPRCSSE*

Click here to download the sequence:
Link to NCBI Protein BLAST