Transcript Information: S_Transcript_5181.p1


Annotated TAIR IDAT3G10405.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3233978-3235118 | Reverse length=212
E-Value6E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.572752161566
Replicate 250.265695076791
Replicate 351.413476534943
Condition 2: 8 Hour
Replicate 146.674439184668
Replicate 245.693445570762
Replicate 347.357378405407
Condition 3: 24 Hour
Replicate 143.380641271416
Replicate 247.358813812839
Replicate 340.688392389385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5181.p1 GENE.S_Transcript_5181~~S_Transcript_5181.p1 ORF type:complete len:212 (+),score=38.05,DUF3783|PF12646.3|2.9e+02,DUF3783|PF12646.3|1.1e-15 S_Transcript_5181:68-703(+)
ATGGCTATGGCCACTGCCACTACTTGGCATCAAATTTTTATCACTGGATTCACTTCAAAACTTCCATTTCCGCCCTCATTTCTGCTGACCCGTTTCTCAGTTCGCCCAAACTCACATCTTTCCTCTCCCTCTTCCTTGTCAGTGAGGAAAGTTCACCATCGTTTGGGAGTCTCCTCCGAAGAATATCCGAGCGAGGAAATTGAAGATTCGAAGTTTGTTCCTCTAAATCCTGAAGATCCAAGATATGGTCCCCCTGCCTTACTGCTTTTGGGATTCAAAGTGGAAGAGGCAGATAAGATACAGCAACTTTTGAAGGACTTAGATGGAGACTTCTTGAAGGTTATCTACTGCACTGAAGACATGATTAATTGCTCGCTTTGGGATGCTGTGAACATTACACAAGAAAGTCTGGAAAATATTAAGATTGCAAGATTACTACCCCGTATATGTTTTCTCTCTGGTCTTACCGGGGAAGAGATGATGCTCTTTATAGACGCCTTCCAAGAAACTGATATTGAGCCAGCAATATTTGCAGCTCTGGTTCCCAATAGTGCCAATAAATCATTACAGGAACTGGTAGAAGAGGTTATGGGAGATCATGAGATGATGACTGCAAAACAATCAGAATATCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5181.p1 GENE.S_Transcript_5181~~S_Transcript_5181.p1 ORF type:complete len:212 (+),score=38.05,DUF3783|PF12646.3|2.9e+02,DUF3783|PF12646.3|1.1e-15 S_Transcript_5181:68-703(+)
MAMATATTWHQIFITGFTSKLPFPPSFLLTRFSVRPNSHLSSPSSLSVRKVHHRLGVSSEEYPSEEIEDSKFVPLNPEDPRYGPPALLLLGFKVEEADKIQQLLKDLDGDFLKVIYCTEDMINCSLWDAVNITQESLENIKIARLLPRICFLSGLTGEEMMLFIDAFQETDIEPAIFAALVPNSANKSLQELVEEVMGDHEMMTAKQSEYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST