Transcript Information: S_Transcript_518109.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6358131183863
Replicate 22.8468115558084
Replicate 32.9746348521936
Condition 2: 8 Hour
Replicate 16.4664086768081
Replicate 28.6600704411845
Replicate 35.5008638980597
Condition 3: 24 Hour
Replicate 13.9461725015267
Replicate 23.2167990624493
Replicate 34.7189631467637


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_518109.p1 GENE.S_Transcript_518109~~S_Transcript_518109.p1 ORF type:5prime_partial len:155 (-),score=13.44,zf-RVT|PF13966.2|9.9e-15,zf-RVT|PF13966.2|6.3e+02 S_Transcript_518109:49-513(-)
AGTGCCTATGAGTGGCTTAGCAAGGAAAATAGGAGGGTTAGGTGGGATAGAGTGGTGTGGAACAGATACAATATCCCAAAGCATTCATTCATAGCTTGGATGCTCATGTTAGGCAAGGCCAGGACAAGGGATACCTTACAGAAGGTGGGAATATGTATGGACACTTCTTGTCCTTTCTATGACACTGATGCAGAGACTTTATCACACCTGTATTTCAAGTGCCCCTTTAGTGCTATAATGCTGCAGTCTTTCTGCTCATGGTGTGGCATCTCTCGGCTAGACTGGACTATTCAGCCCTTGTCAAAATGGATCCAAAGAAGAGTCAAGTATTCCAAGATAGCTAAGAAGGTGATATATGCTAGACTGGTAGCACTCATGTATTACATATGGACAGCAAGGAACTCTGCTATCTGGGAGAGAAAAGTACCAGTACCTGGCCAAACTTTTCACAGGCTACCGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_518109.p1 GENE.S_Transcript_518109~~S_Transcript_518109.p1 ORF type:5prime_partial len:155 (-),score=13.44,zf-RVT|PF13966.2|9.9e-15,zf-RVT|PF13966.2|6.3e+02 S_Transcript_518109:49-513(-)
SAYEWLSKENRRVRWDRVVWNRYNIPKHSFIAWMLMLGKARTRDTLQKVGICMDTSCPFYDTDAETLSHLYFKCPFSAIMLQSFCSWCGISRLDWTIQPLSKWIQRRVKYSKIAKKVIYARLVALMYYIWTARNSAIWERKVPVPGQTFHRLPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST