Transcript Information: S_Transcript_5182.p1


Annotated TAIR IDAT3G10405.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen development; LOCATED IN: chloroplast; Has 44 Blast hits to 44 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3233978-3235118 | Reverse length=212
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9652383867682
Replicate 20.91451977440476
Replicate 30.57334930829846
Condition 2: 8 Hour
Replicate 10
Replicate 20.9273305135638
Replicate 30.88355844994741
Condition 3: 24 Hour
Replicate 10.56592962410866
Replicate 20.7045744531507
Replicate 30.52273667160862


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5182.p1 GENE.S_Transcript_5182~~S_Transcript_5182.p1 ORF type:complete len:193 (+),score=27.99,DUF3783|PF12646.3|7.4e+03,DUF3783|PF12646.3|2.5e+02,DUF3783|PF12646.3|3e-07 S_Transcript_5182:68-646(+)
ATGGCTATGGCCACTGCCACTACTTGGCATCAAATTTTTATCACTGGATTCACTTCAAAACTTCCATTTCCGCCCTCATTTCTGCTGACCCGTTTCTCAGTTCGCCCAAACTCACATCTTTCCTCTTCCTCTTCCTTGTCACTGAGGAAAGTTCACCATCGTTTGAGAGTCTCCTCCGAAGAATACCCGAGCGAGGGAATTGAAGATTCGAAGTTTGTTCCTCTAAATCCTGAAGATCCAAGATATGGTCCCCCTGCCTTACTGCTTTTGGGATTCAAAGTGGAAGAGGCAGATAAGATACAGCAACTTTTGAAGGACTTAGATGGAGACTTCTTGAAGGTTATCTACTGCACTGAAGACCTGATTACTCGCTCGCTTTGGGATGCAGTGAACATTACACAAGAAAGTCTGGAAAATATTAAGATTGCAAGATTACTACCCCGTATATGTTTTCTCTCTGGTCTTACCGGGGAAGAGATGATGCTCTTTATAGACGCCTTCCAAGAAACTGATATTGAGCCAGCAATATTTGCAGCTCTGGTTCCCAATAGTGCAATAAATCATTACAGGAACTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5182.p1 GENE.S_Transcript_5182~~S_Transcript_5182.p1 ORF type:complete len:193 (+),score=27.99,DUF3783|PF12646.3|7.4e+03,DUF3783|PF12646.3|2.5e+02,DUF3783|PF12646.3|3e-07 S_Transcript_5182:68-646(+)
MAMATATTWHQIFITGFTSKLPFPPSFLLTRFSVRPNSHLSSSSSLSLRKVHHRLRVSSEEYPSEGIEDSKFVPLNPEDPRYGPPALLLLGFKVEEADKIQQLLKDLDGDFLKVIYCTEDLITRSLWDAVNITQESLENIKIARLLPRICFLSGLTGEEMMLFIDAFQETDIEPAIFAALVPNSAINHYRNW*

Click here to download the sequence:
Link to NCBI Protein BLAST