Transcript Information: S_Transcript_518420.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35963515182676
Replicate 20.44721870724692
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.34083843790697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_518420.p1 GENE.S_Transcript_518420~~S_Transcript_518420.p1 ORF type:3prime_partial len:148 (+),score=9.95,RVT_1|PF00078.23|2.8e-11 S_Transcript_518420:177-617(+)
ATGAGACAAGGCGATCCTCTCTGGCCCTATCTCTTTGTCTTGTGTATGGAGAGATTCTCCCACGTAATCGAAGCGGCAGTGAAATGTGGTCATTGGAAGTCTATTACTTTTTGTCGTAATGGACCTACACTATCACATTTATTTTTCGCTGATGACCTTGTCTTATTCAGCGAGGCTTCGGTTGAACAAACCCACATCATCACACAGTGCTTGGATAATTTCTGCATGGCGTATGGGCAAAGAGTGAGCCACCATAAGTCTCGTATCCTCTTATCAAAAGGAGCTCCACCAGGACTAGGGGATGTTGTTAGTCAAGCTTTGAATATCCCACTTACGCATGACTTGGGTAAATACCTTAGAATACCCACTATCCAAGGGAGGGTCACTAAAGCCATGTACAAGCATGTTATTGATCCAGTGAATGATCGCCTCACTGGCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_518420.p1 GENE.S_Transcript_518420~~S_Transcript_518420.p1 ORF type:3prime_partial len:148 (+),score=9.95,RVT_1|PF00078.23|2.8e-11 S_Transcript_518420:177-617(+)
MRQGDPLWPYLFVLCMERFSHVIEAAVKCGHWKSITFCRNGPTLSHLFFADDLVLFSEASVEQTHIITQCLDNFCMAYGQRVSHHKSRILLSKGAPPGLGDVVSQALNIPLTHDLGKYLRIPTIQGRVTKAMYKHVIDPVNDRLTGW

Click here to download the sequence:
Link to NCBI Protein BLAST