Transcript Information: S_Transcript_518533.p1


Annotated TAIR IDAT4G16640.1
Annotated Gene NameMatrixin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9367396-9368490 | Reverse length=364
E-Value9.8E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20845692873509
Replicate 20.34563116800284
Replicate 30.096306715841256
Condition 2: 8 Hour
Replicate 10
Replicate 20.11682427488108
Replicate 30.44523963665757
Condition 3: 24 Hour
Replicate 10.1140724986454
Replicate 20
Replicate 30.065853901841034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_518533.p1 GENE.S_Transcript_518533~~S_Transcript_518533.p1 ORF type:5prime_partial len:383 (+),score=30.56,Peptidase_M10|PF00413.20|3.5e-48,PG_binding_1|PF01471.14|5.3e-14 S_Transcript_518533:3-1151(+)
CCAAATTCTAAGGTGAGACCAGGTATCACACCCGCCATGTGCTTTCTGTTTCCCTTTTCCCGTTACGATCATGTTCACCTGATCCTCTTATTGATCTTTCCGGTTGCCATTTGGGCCAGGCCCATCCCAAATATAACTAACAACTTAACGGTATTAACCGTCGACGATGCATTCAACTCTACCACGTGGCACAATTTCGCGAGGTTCCTGGACTTGGAAAGAGGGAGCCAAGTCACCGGTGTGTCAGAGCTCAAAAAGTACTTCCACCAATTCGGTTACCTCCCATCACCGGTCAACTTGACCGACGTGTTTGACTCCAACATGGAAGCAGCTGTGCGAGATTACCAAAAGAACCTTGGGTTGCCGGTTACCGGTAAGCTCGACGCAGGGACAATCAACCTCATTATGGCTCCCAGATGTGGTATGAGCGATTCCCACACACGCGCCAACATCAAAGCAGCCCACAAAAAACTCCACCAAACACGCCACTACGCTTTCTTCAATGGTCGTCCAAGGTGGGCTAGGCAAAGGCCAATGACTCTCACGTATTCCTTTTCAAAGGATCATTTGGTGAGCTACCTTAGTGAGGAGGACATTAAGGGCGTGTTTGGACGGGCATTTTCACGATGGGCGAATGTGATACCGGTGAATTTCACTGAAACCGAGGACTACCAAACGGCGGATATCAAAATCGGGTTTTATGATGGGGATCATGGGGATGGGGAGCCCTTTGATGGGGTGCTGGGGGTTTTAGCTCATGCCTTTTCCCCTGAAAATGGGAGGCTTCATTTAGATGGAGCTGAAACGTGGGCCGTCGATTTTGATCAACAGAATTCAAGGGTTGCGATTGATTTAGAATCGGTGGCTACCCACGAGATTGGTCACGTGCTTGGGCTGGCCCACTCTTCGGTTAAGGAAGCTATTATGTACCCGAGTGTGAGCCCCAGGAGTAAAAAAGTGGACTTGAAAATTGATGACGTGGAAGGGGTCCAGACTTTGTATGGGTCCAACCCCAATTTCAGCTTCAGCTCTTTGTTGGAGTCTGAGGAGACCTCGTCAAGCGGTGCACTTGGTGGGTCCCCTTCTTGGTCATTGTGGGCCATCATTTTGGGCTTGGCCCATTTGATATTTTTTTTACACTGTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_518533.p1 GENE.S_Transcript_518533~~S_Transcript_518533.p1 ORF type:5prime_partial len:383 (+),score=30.56,Peptidase_M10|PF00413.20|3.5e-48,PG_binding_1|PF01471.14|5.3e-14 S_Transcript_518533:3-1151(+)
PNSKVRPGITPAMCFLFPFSRYDHVHLILLLIFPVAIWARPIPNITNNLTVLTVDDAFNSTTWHNFARFLDLERGSQVTGVSELKKYFHQFGYLPSPVNLTDVFDSNMEAAVRDYQKNLGLPVTGKLDAGTINLIMAPRCGMSDSHTRANIKAAHKKLHQTRHYAFFNGRPRWARQRPMTLTYSFSKDHLVSYLSEEDIKGVFGRAFSRWANVIPVNFTETEDYQTADIKIGFYDGDHGDGEPFDGVLGVLAHAFSPENGRLHLDGAETWAVDFDQQNSRVAIDLESVATHEIGHVLGLAHSSVKEAIMYPSVSPRSKKVDLKIDDVEGVQTLYGSNPNFSFSSLLESEETSSSGALGGSPSWSLWAIILGLAHLIFFLHCE*

Click here to download the sequence:
Link to NCBI Protein BLAST