Transcript Information: S_Transcript_518778.p1


Annotated TAIR IDAT3G22630.1
Annotated Gene Name20S proteasome beta subunit D1
Annotated Gene Symbol(s)PBD1, PRCGB
Annotation TypeHomolog
Chromosome Positionchr3:8009709-8010774 | Reverse length=204
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39136766522324
Replicate 20.32445278761051
Replicate 30.13560835355589
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.33329134671099
Replicate 30.18545620886115


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_518778.p1 GENE.S_Transcript_518778~~S_Transcript_518778.p1 ORF type:complete len:136 (+),score=11.45,Proteasome|PF00227.22|3e-22 S_Transcript_518778:105-512(+)
ATGGACTTTCATGTCGGCATCCGCGGTCCTGGCTTTACCATGCTATGCTGCGACACAGCAGCTGTGCAGCAGATCATCACCATTAAAAATGATGAAGAAAAGCTTGTGCCTGTCGACCAGCACAAGCTCTTTTCGTTATCAGGCGAGGCAGGGGACCGAGTGCACTTCTCGGAGTTCATTATAGCAAACGCGAAGCTGTATGCTCTGAGGAACGGGCAGTCCCTTAGCACCCATGCCGTGGCGCACTTCACACGCAAAGAGCTGGCCACTGCCATAAGGCAGGCACCAATGATGTGCAATCTTTTGCTGGCAGGCTATGATGAAGGTGTTGGCACATCACTCTTCTGGTTCGACTATTTGGGAACCGTGCACAAGATGAACAGCTGTGGCACAGGCAATGTGTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_518778.p1 GENE.S_Transcript_518778~~S_Transcript_518778.p1 ORF type:complete len:136 (+),score=11.45,Proteasome|PF00227.22|3e-22 S_Transcript_518778:105-512(+)
MDFHVGIRGPGFTMLCCDTAAVQQIITIKNDEEKLVPVDQHKLFSLSGEAGDRVHFSEFIIANAKLYALRNGQSLSTHAVAHFTRKELATAIRQAPMMCNLLLAGYDEGVGTSLFWFDYLGTVHKMNSCGTGNVS*

Click here to download the sequence:
Link to NCBI Protein BLAST