Transcript Information: S_Transcript_518843.p1


Annotated TAIR IDAT1G20960.1
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase, putative
Annotated Gene Symbol(s)emb1507
Annotation TypeOrtholog
Chromosome Positionchr1:7302591-7309914 | Reverse length=2171
E-Value2.7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.16321005383717
Condition 2: 8 Hour
Replicate 10.37744053658643
Replicate 20
Replicate 30.18863581951311
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_518843.p1 GENE.S_Transcript_518843~~S_Transcript_518843.p1 ORF type:internal len:113 (+),score=17.69,Sec63|PF02889.12|6.7e-33 S_Transcript_518843:3-338(+)
CAGAGTGCAGATCGTCTTCTCCGACCACTTTTTGAGATAGTTTTGAAAAGAGGATGGCCTCAAGTGGCAGAAAAAGCTTTGAATTTGTGCAAAATGGTTCTGAAGAGGATGTGGCATGTTAAGACACCTCTGTGTCAGTTTAATGGGATTCCCACTGACATACTGAAAAAATTGGACAGGAAAGATCTAAACTGGGAAAGGTACTATGACCTTTCTCCTCAAGAGCTTGGGGAGCTCATAAGATACCCAAAGATAGGAAGAAAACTTCATAAATTCGTTCACCAGTTTCCAAAGCTGAACCTTGCTGCGTATGTCCAGCCAAGTACCCGTTCAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_518843.p1 GENE.S_Transcript_518843~~S_Transcript_518843.p1 ORF type:internal len:113 (+),score=17.69,Sec63|PF02889.12|6.7e-33 S_Transcript_518843:3-338(+)
QSADRLLRPLFEIVLKRGWPQVAEKALNLCKMVLKRMWHVKTPLCQFNGIPTDILKKLDRKDLNWERYYDLSPQELGELIRYPKIGRKLHKFVHQFPKLNLAAYVQPSTRSM

Click here to download the sequence:
Link to NCBI Protein BLAST