Transcript Information: S_Transcript_5190.p1


Annotated TAIR IDAT1G56500.1
Annotated Gene Namehaloacid dehalogenase-like hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21159775-21167092 | Forward length=1055
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.49028279406
Replicate 250.621678618396
Replicate 351.12416529009
Condition 2: 8 Hour
Replicate 146.18089951987
Replicate 247.657805107694
Replicate 343.875360674025
Condition 3: 24 Hour
Replicate 165.593931023996
Replicate 258.827505489216
Replicate 357.493941113426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5190.p1 GENE.S_Transcript_5190~~S_Transcript_5190.p1 ORF type:complete len:737 (+),score=164.61,NHL|PF01436.17|3.6e+03,NHL|PF01436.17|6.8e+03,NHL|PF01436.17|0.63,NHL|PF01436.17|6.4e-06,NHL|PF01436.17|0.011,NHL|PF01436.17|0.017,NHL|PF01436.17|5.1e-05,NHL|PF01436.17|5.2,Thioredoxin_8|PF13905.2|2e-12,SGL|PF08450.8|2.3e+02,SGL|PF08450.8|3.2e-07,SGL|PF08450.8|11,Redoxin|PF08534.6|7.1e-07,AhpC-TSA|PF00578.17|6.9e-07 S_Transcript_5190:1748-3958(+)
ATGCAAGTTGTTATGATCTTGCAGGCAATGCAATATGCATCTCCAAAAGCACTTTGGAATCTTTTATTTGGAGTGAATGGTCCAAGTATTGAACCAAATGAAGGTCAGTCACGGTCTGGCAGGGTTGAACAGCTTGTTAATTACATATCTGACCTAGAAAGCAGGGGAAATGCTCTTACAGTGCCTGAATTCCCATCAAAGCTTGATTGGCTAAACACTGCCCCACTTCAGTTTCGCAGGGATCTGAAAGGAAAAGTGGTTGTGCTGGATTTCTGGACTTACTGCTGCATTAACTGTATGCATGTTCTGCCTGATCTTGAGTTCTTGGAGAAGAAGTACAAGGATATGCCGTTCACTGTCATTGGAGTACATTCTGCTAAATTTGACAATGAGAAAGACTTGGAAGCAATTCGCAACGCAGTCCTAAGATATGGAATTACTCATCCTGTAGTGAATGATGGGGACATGTATTTATGGCGTGAGCTAGGGGTTAATTCATGGCCGACATTTGTCATTGTTGGACCCAATGGTAGGCTTCTAGCACAATCAGCAGGAGAAGGTCGCCGAAAGGGAAATAGAAGGGAAGCGATGCATGATTCTTTCCCCCCCTGGCTTCAGGACCTTGATGACATTGTGGAGGCAGCTCTTATGTTTTATGGAGAAAGGAAGGTCTTAGATGGCACACCACTTCCTCTGCGTTTGGAGAAAGATAATGACGCGCGATTGCTGACCTCTCCATTGAAGTTTCCTGGAAAGCTGGAAGTGGATCTCCTCAACAATAGGCTTTTCATTTCAGACAGCAACCACAACCGTATTGTTGTCACTGATCTGGATGGGAATTATATTACACAAATCGGGAGCTCAGGTGAGGAGGGTTTCCGCGATGGAAGTTTCGAAGATGCAACTTTTAATAGGCCTCAGGGCCTCGCTTACAATGCAAAAAGGAATGCGCTTTATGTTGCAGATACTGAAAATCATGCTTTGAGAGAAATTGATTTTGTTAATGAAACGGTTCGTACACTTTCTGGTAACGGAACAAAGGGTTCAGATTACAGAGGAGGGGGAAGAAAAACCACTCAGCCTCTCAATTCTCCATGGGATGTCTGTTTTGACCCTTCTAGTGAGAAAGTGTACATTGCAATGGCCGGGCAGCATCAGATCTGGGAGCACAATCTATCAGATGGGACTACCATAGCTTTTAGTGGTGATGGTTATGAAAGAAACTTGAATGGTTCAAGTCCTATTAGCACTTCATTTGCACAACCTTCCGGAATGTCATTATCCCCTGATATGAAGGAGGTGTACATCGCCGATAGTGAGAGTAGCTCCGTCCGAGCTCTTGATCTCAAGACTGGAGGATCAAGATTGCTAGCTGGTGGTGATCCTATTTTCCCTGACAATTTGTTCAAATTTGGAGATCATGACGGCATAGGTTCTGAAGTTCTTCTTCAACATCCATTGGGTGTCTGTTTTGGACAAGATGGCCCATTATATATTGCAGATTCTTATAACCACAAGGTAAAGAAGCTTGATCTATCAAATAAACGAGTTACGACTTTAGCTGGGACTGGAAAAGCTGGTTTCAAGGATGGCAAAGCTCTTGCAGCTCAGCTCTCAGAGCCATCAGGACTTGTTGAAGTAGGCAAGGGAAAACTTCTCATAGCTGATACAAACAATAGTATAATCCGATACATGGACTTGAACCAGCAAGACCCTGATCTTCTTACATTGGAGTTGAAAGGTGTGCAGCCTCCTGCTCCAAGAGGCAAAACCATGAAAAGGTTGCGGAGGCGATTATCAGCTGACACCCAGGTCATCAAGGTGGATGGTGGTCCATCAAAGGAGGGCAATTTGTACCTGAGAATATCACTACCTGAAGGATACCATTTCTCAAAGGAAGCACGGAGTAAATTCAACATAGAAACAGAGCCAGATAACACAGTCGCCATTGAGCCCTTGGATGGTGCTCTCAGTTCAGAAGGATCTGCCACACTTCATTTTAAGAGATACACTCCTTCAGCATTTATGGGAAGAATAAATTGCAAGGTCTATTATTGTAAAGAAGATGAAGTTTGTTTATACCAGTCACTAGCTTTTGAAGTACCCTTCACAGAAGAAGTTCCGGACTCACCCCCAGCAGAAATTAATCTCCAGTATGTTGTGAAGCCAAGAGACACTAGAGGCAGCCTACAGCTACCAGCTGCACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5190.p1 GENE.S_Transcript_5190~~S_Transcript_5190.p1 ORF type:complete len:737 (+),score=164.61,NHL|PF01436.17|3.6e+03,NHL|PF01436.17|6.8e+03,NHL|PF01436.17|0.63,NHL|PF01436.17|6.4e-06,NHL|PF01436.17|0.011,NHL|PF01436.17|0.017,NHL|PF01436.17|5.1e-05,NHL|PF01436.17|5.2,Thioredoxin_8|PF13905.2|2e-12,SGL|PF08450.8|2.3e+02,SGL|PF08450.8|3.2e-07,SGL|PF08450.8|11,Redoxin|PF08534.6|7.1e-07,AhpC-TSA|PF00578.17|6.9e-07 S_Transcript_5190:1748-3958(+)
MQVVMILQAMQYASPKALWNLLFGVNGPSIEPNEGQSRSGRVEQLVNYISDLESRGNALTVPEFPSKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVIGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMYLWRELGVNSWPTFVIVGPNGRLLAQSAGEGRRKGNRREAMHDSFPPWLQDLDDIVEAALMFYGERKVLDGTPLPLRLEKDNDARLLTSPLKFPGKLEVDLLNNRLFISDSNHNRIVVTDLDGNYITQIGSSGEEGFRDGSFEDATFNRPQGLAYNAKRNALYVADTENHALREIDFVNETVRTLSGNGTKGSDYRGGGRKTTQPLNSPWDVCFDPSSEKVYIAMAGQHQIWEHNLSDGTTIAFSGDGYERNLNGSSPISTSFAQPSGMSLSPDMKEVYIADSESSSVRALDLKTGGSRLLAGGDPIFPDNLFKFGDHDGIGSEVLLQHPLGVCFGQDGPLYIADSYNHKVKKLDLSNKRVTTLAGTGKAGFKDGKALAAQLSEPSGLVEVGKGKLLIADTNNSIIRYMDLNQQDPDLLTLELKGVQPPAPRGKTMKRLRRRLSADTQVIKVDGGPSKEGNLYLRISLPEGYHFSKEARSKFNIETEPDNTVAIEPLDGALSSEGSATLHFKRYTPSAFMGRINCKVYYCKEDEVCLYQSLAFEVPFTEEVPDSPPAEINLQYVVKPRDTRGSLQLPAAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST